G426920


Basic Information

Item Value
gene id G426920
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15149842 ~ 15150398 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490174
CAAATTTTCATGTAACCTCAATGCCAACATTTTTATTAGCGTAAACATAGCTAGCTATTACAAGCTAATTCAAAAAATGCTAACTTGCTAATTTGCTAACATGTTAACAATAGCATGGTATAGCACTTGCTGAATGAGTGCAGCAATATAAAGCATTTAACATACTTCCTCTCAAACCAAGCCACATGCACCACTTGTCACCATGATGGTAACTCTCCAAAAACCCACATTAACAGAAACTATTCTAAATGAACATAACAAAACATTAATCACTACTAAATCTCCCAGTTAACATTAATCTTGCACAAAAAAAAAAACAAAACAAAAAAAAAAACATTATATAACATTTCATTTTAGAATTTACTCTCCCTTTCGAGTGCCATGGGCAAAGCATGCTGGGAAATAGAAATCCCAGCCCAGTTTGAGTTAAACTTACTTTAAAATGTATCAGTTCTGTGAACTTGATGGAATTGTTGAACTCCAAAACTGACAAAACAAAAGCACCATAAAATTATTATAAAAACAGTTCAAATGTGCATTATATTGCAAGTCTCCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490174 True 557 lncRNA 0.32 1 15149842 15150398

Neighbor

gene id symbol gene type direction distance location
CI01000304_15140709_15147357 NA coding upstream 2285 15140561 ~ 15147557 (+)
CI01000304_15047768_15063987 ROBO4 coding upstream 85672 15047768 ~ 15064170 (+)
CI01000304_15040739_15045239 NA coding upstream 104585 15040552 ~ 15045257 (+)
CI01000304_15034188_15038152 TMEM218 coding upstream 111344 15032081 ~ 15038498 (+)
CI01000304_14695603_14740389 NTM coding upstream 408763 14695603 ~ 14741079 (+)
CI01000304_15231039_15234179 NA coding downstream 80641 15231039 ~ 15234583 (+)
CI01000304_15265823_15269133 MSANTD2 coding downstream 114570 15264968 ~ 15269591 (+)
CI01000304_15315146_15318470 ESAMA coding downstream 164748 15315146 ~ 15319987 (+)
CI01000304_15348138_15379777 FOXO1B, FOXO1 coding downstream 197560 15347958 ~ 15380003 (+)
CI01000304_15423818_15456305 LHFP coding downstream 271213 15421611 ~ 15456881 (+)
G426853 NA non-coding upstream 205982 14943644 ~ 14943860 (+)
G426851 NA non-coding upstream 207628 14941924 ~ 14942214 (+)
G426834 NA non-coding upstream 217915 14931691 ~ 14931927 (+)
G426833 NA non-coding upstream 219049 14930508 ~ 14930793 (+)
G426923 NA non-coding downstream 24881 15175279 ~ 15175635 (+)
G426928 NA non-coding downstream 43911 15194309 ~ 15194689 (+)
G426929 NA non-coding downstream 49466 15199864 ~ 15200129 (+)
G426930 NA non-coding downstream 52251 15202649 ~ 15202986 (+)
G426941 NA non-coding downstream 71223 15221621 ~ 15222701 (+)
G426828 NA other upstream 199250 14948890 ~ 14950592 (+)
G426312 NA other upstream 818956 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1570995 13578049 ~ 13595097 (+)
G425718 NA other upstream 2710756 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4594138 10555216 ~ 10572164 (+)
G427860 NA other downstream 735056 15885454 ~ 15889591 (+)
G428017 NA other downstream 932832 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1354464 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1605548 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 1860332 17009769 ~ 17023882 (+)

Expression


Co-expression Network