Gene
RNA
| Item | Value |
|---|---|
| gene id | G426928 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 15194309 ~ 15194689 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU490182 | False | 337 | lncRNA | 0.39 | 1 | 15194309 | 15194645 |
| TU490183 | True | 381 | lncRNA | 0.40 | 1 | 15194309 | 15194689 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_15148523_15151340 | NA | coding | upstream | 42914 | 15147834 ~ 15151395 (+) |
| CI01000304_15140709_15147357 | NA | coding | upstream | 46752 | 15140561 ~ 15147557 (+) |
| CI01000304_15047768_15063987 | ROBO4 | coding | upstream | 130139 | 15047768 ~ 15064170 (+) |
| CI01000304_15040739_15045239 | NA | coding | upstream | 149052 | 15040552 ~ 15045257 (+) |
| CI01000304_15034188_15038152 | TMEM218 | coding | upstream | 155811 | 15032081 ~ 15038498 (+) |
| CI01000304_15231039_15234179 | NA | coding | downstream | 36350 | 15231039 ~ 15234583 (+) |
| CI01000304_15265823_15269133 | MSANTD2 | coding | downstream | 70279 | 15264968 ~ 15269591 (+) |
| CI01000304_15315146_15318470 | ESAMA | coding | downstream | 120457 | 15315146 ~ 15319987 (+) |
| CI01000304_15348138_15379777 | FOXO1B, FOXO1 | coding | downstream | 153269 | 15347958 ~ 15380003 (+) |
| CI01000304_15423818_15456305 | LHFP | coding | downstream | 226922 | 15421611 ~ 15456881 (+) |
| G426923 | NA | non-coding | upstream | 18674 | 15175279 ~ 15175635 (+) |
| G426920 | NA | non-coding | upstream | 43911 | 15149842 ~ 15150398 (+) |
| G426853 | NA | non-coding | upstream | 250449 | 14943644 ~ 14943860 (+) |
| G426851 | NA | non-coding | upstream | 252095 | 14941924 ~ 14942214 (+) |
| G426929 | NA | non-coding | downstream | 5175 | 15199864 ~ 15200129 (+) |
| G426930 | NA | non-coding | downstream | 7960 | 15202649 ~ 15202986 (+) |
| G426941 | NA | non-coding | downstream | 26932 | 15221621 ~ 15222701 (+) |
| G426951 | NA | non-coding | downstream | 59236 | 15253925 ~ 15255239 (+) |
| G426933 | NA | non-coding | downstream | 127327 | 15322016 ~ 15333685 (+) |
| G426828 | NA | other | upstream | 243717 | 14948890 ~ 14950592 (+) |
| G426312 | NA | other | upstream | 863423 | 14330048 ~ 14330886 (+) |
| CI01000304_13578347_13595075 | NA | other | upstream | 1615462 | 13578049 ~ 13595097 (+) |
| G425718 | NA | other | upstream | 2755223 | 12436554 ~ 12436605 (+) |
| CI01000304_10555326_10571933 | NA | other | upstream | 4638605 | 10555216 ~ 10572164 (+) |
| G427860 | NA | other | downstream | 690765 | 15885454 ~ 15889591 (+) |
| G428017 | NA | other | downstream | 888541 | 16083230 ~ 16083714 (+) |
| CI01000304_16505174_16506124 | NA | other | downstream | 1310173 | 16504764 ~ 16513625 (+) |
| CI01000304_16761621_16764983 | EXOSC8 | other | downstream | 1561257 | 16761372 ~ 16765057 (+) |
| CI01000304_17009769_17023302 | ZDHHC20, ZDHHC20A | other | downstream | 1816041 | 17009769 ~ 17023882 (+) |
