G426929


Basic Information

Item Value
gene id G426929
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15199864 ~ 15200129 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490186
CAGGCATCAACCTGTAAACTTAAAAAAACTGTTCTAAAAAAAAACCTTAAAAAAAAAAAAAAAAACACCCCTCAGCATCAGTAGGTCCAAGTAGGAATCATTTTGATTCGATCTTGCTCATAGACGTTCATTGCACAATATTACAGCCAATAACATAACAGTACATCAATCTATATCAGCCACACATACTATATCACTCTCACATACTCAAGCAAAAACACACACGTGCGCGTGCCACTACATATATCAGACTGTATCGAGCATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490186 True 266 lncRNA 0.36 1 15199864 15200129

Neighbor

gene id symbol gene type direction distance location
CI01000304_15148523_15151340 NA coding upstream 48469 15147834 ~ 15151395 (+)
CI01000304_15140709_15147357 NA coding upstream 52307 15140561 ~ 15147557 (+)
CI01000304_15047768_15063987 ROBO4 coding upstream 135694 15047768 ~ 15064170 (+)
CI01000304_15040739_15045239 NA coding upstream 154607 15040552 ~ 15045257 (+)
CI01000304_15034188_15038152 TMEM218 coding upstream 161366 15032081 ~ 15038498 (+)
CI01000304_15231039_15234179 NA coding downstream 30910 15231039 ~ 15234583 (+)
CI01000304_15265823_15269133 MSANTD2 coding downstream 64839 15264968 ~ 15269591 (+)
CI01000304_15315146_15318470 ESAMA coding downstream 115017 15315146 ~ 15319987 (+)
CI01000304_15348138_15379777 FOXO1B, FOXO1 coding downstream 147829 15347958 ~ 15380003 (+)
CI01000304_15423818_15456305 LHFP coding downstream 221482 15421611 ~ 15456881 (+)
G426928 NA non-coding upstream 5175 15194309 ~ 15194689 (+)
G426923 NA non-coding upstream 24229 15175279 ~ 15175635 (+)
G426920 NA non-coding upstream 49466 15149842 ~ 15150398 (+)
G426853 NA non-coding upstream 256004 14943644 ~ 14943860 (+)
G426930 NA non-coding downstream 2520 15202649 ~ 15202986 (+)
G426941 NA non-coding downstream 21492 15221621 ~ 15222701 (+)
G426951 NA non-coding downstream 53796 15253925 ~ 15255239 (+)
G426933 NA non-coding downstream 121887 15322016 ~ 15333685 (+)
G426931 NA non-coding downstream 139165 15339294 ~ 15341816 (+)
G426828 NA other upstream 249272 14948890 ~ 14950592 (+)
G426312 NA other upstream 868978 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1621017 13578049 ~ 13595097 (+)
G425718 NA other upstream 2760778 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4644160 10555216 ~ 10572164 (+)
G427860 NA other downstream 685325 15885454 ~ 15889591 (+)
G428017 NA other downstream 883101 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1304733 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1555817 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 1810601 17009769 ~ 17023882 (+)

Expression


Co-expression Network