G427657


Basic Information

Item Value
gene id G427657
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15275216 ~ 15275669 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU491060
GCGAATGAGACGAGTGAGAAAGAGCAGGCGCCCGCGCGGGTGTGTGTCACTTCACCGTGACAGAGAAGAGAGCGAGAACGCGCAGCTTACGTTATTGCCTGTGCCGCTGGTAACAAAACGGATCGGCTCGGAATCGGTAAGAAGTGAGACCGATCGGCCGATCGCCGATCATGAGGGAAATCGGCCGATTCCGATCCCTGGCCGATCGATCGAGATATTTTGACAAATAACCATTTCATTTATGATTATAAGTTTTTTTTTGTTTTTTTTTGTTTTTTTTTTTAAATTAATAATATGGGTAACACTTTATTACTTTCATTACTGTTTATTCCCTTTCATGATAAGTCATTTTAAAGACATTATATAATGTTTCACATATCAGTAATTCATGTACATACTCATGGTTAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU491060 True 411 lncRNA 0.40 2 15275216 15275669

Neighbor

gene id symbol gene type direction distance location
CI01000304_15132805_15136196 ROBO3, ROBO2 coding downstream 139020 15132227 ~ 15136196 (-)
CI01000304_15075003_15110723 ROBO3 coding downstream 164220 15074301 ~ 15110996 (-)
CI01000304_14957226_14983228 PKNOX2 coding downstream 291988 14956603 ~ 14983228 (-)
CI01000304_14949765_14955677 PANX3 coding downstream 319539 14949187 ~ 14955677 (-)
CI01000304_14834446_14835469 NA coding downstream 439667 14834414 ~ 14835549 (-)
CI01000304_15322368_15331609 FEZ1 coding upstream 46121 15321790 ~ 15331739 (-)
CI01000304_15341701_15346353 VPS26BL, V26BL, VPS26B, V26BB coding upstream 64896 15340565 ~ 15347178 (-)
CI01000304_15584327_15694046 UVRAG coding upstream 308658 15584327 ~ 15694046 (-)
CI01000304_15703390_15711806 DGAT2 coding upstream 427503 15703172 ~ 15712119 (-)
CI01000304_15715861_15722546 MOGAT2 coding upstream 439755 15715424 ~ 15722546 (-)
G427632 NA non-coding downstream 71715 15203264 ~ 15203501 (-)
G427631 NA non-coding downstream 80557 15194276 ~ 15194659 (-)
G427588 NA non-coding downstream 359545 14915463 ~ 14915671 (-)
G427583 NA non-coding downstream 413348 14861400 ~ 14861868 (-)
G427579 NA non-coding downstream 417973 14856975 ~ 14857243 (-)
G428340 NA non-coding upstream 190256 15465925 ~ 15466511 (-)
G428376 NA non-coding upstream 211710 15487379 ~ 15487595 (-)
G428377 NA non-coding upstream 212258 15487927 ~ 15488140 (-)
G428378 NA non-coding upstream 212788 15488457 ~ 15488714 (-)
G428379 NA non-coding upstream 214140 15489809 ~ 15490014 (-)
G427376 NA other downstream 13811 15258964 ~ 15261405 (-)
G427423 NA other downstream 913324 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 987612 14286960 ~ 14294449 (-)
CI01000304_14265881_14269102 NA other downstream 1005645 14265476 ~ 14269571 (-)
G427309 NA other downstream 1066917 14181932 ~ 14237078 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other upstream 1503695 16769417 ~ 16780398 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other upstream 1578896 16854565 ~ 16860911 (-)
G429331 NA other upstream 2648194 17923863 ~ 17924684 (-)
G429499 NA other upstream 2962050 18237719 ~ 18238319 (-)
G429673 NA other upstream 3310773 18586442 ~ 18591856 (-)

Expression


Co-expression Network