G428379


Basic Information

Item Value
gene id G428379
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15489809 ~ 15490014 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU491879
GATTTTGTCCTGTATATCTGTTTCTGAAGATTTAGGGAATTTGAACCAAATGAAAGAATGGATTGAGCTGTCTGGGTGGTAAGGGCACAGACTTGGCAAAAGTTTTGGGTCTAGATGAACACTGATCTACTAAGGCGGCAGAGATTAACAGGGCAGAAAGAGGTAACAAGTAGAACAATAGATAAACTGTACAGACACATCTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU491879 True 206 lncRNA 0.40 1 15489809 15490014

Neighbor

gene id symbol gene type direction distance location
CI01000304_15341701_15346353 VPS26BL, V26BL, VPS26B, V26BB coding downstream 142631 15340565 ~ 15347178 (-)
CI01000304_15322368_15331609 FEZ1 coding downstream 158070 15321790 ~ 15331739 (-)
CI01000304_15132805_15136196 ROBO3, ROBO2 coding downstream 353613 15132227 ~ 15136196 (-)
CI01000304_15075003_15110723 ROBO3 coding downstream 378813 15074301 ~ 15110996 (-)
CI01000304_14957226_14983228 PKNOX2 coding downstream 506581 14956603 ~ 14983228 (-)
CI01000304_15584327_15694046 UVRAG coding upstream 94313 15584327 ~ 15694046 (-)
CI01000304_15703390_15711806 DGAT2 coding upstream 213158 15703172 ~ 15712119 (-)
CI01000304_15715861_15722546 MOGAT2 coding upstream 225410 15715424 ~ 15722546 (-)
CI01000304_15755554_15770449 NA coding upstream 264462 15754452 ~ 15770768 (-)
CI01000304_15782838_15784193 ATG101, ATG101.L coding upstream 292713 15782727 ~ 15784193 (-)
G428378 NA non-coding downstream 1095 15488457 ~ 15488714 (-)
G428377 NA non-coding downstream 1669 15487927 ~ 15488140 (-)
G428376 NA non-coding downstream 2214 15487379 ~ 15487595 (-)
G428340 NA non-coding downstream 23298 15465925 ~ 15466511 (-)
G427657 NA non-coding downstream 214140 15275216 ~ 15275669 (-)
G428383 NA non-coding upstream 8401 15498415 ~ 15503512 (-)
G428382 NA non-coding upstream 14740 15504754 ~ 15510980 (-)
G428385 NA non-coding upstream 26449 15516463 ~ 15516690 (-)
G428432 NA non-coding upstream 83718 15573732 ~ 15574033 (-)
G428450 NA non-coding upstream 259570 15749584 ~ 15750897 (-)
G427376 NA other downstream 228404 15258964 ~ 15261405 (-)
G427423 NA other downstream 1127917 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 1202205 14286960 ~ 14294449 (-)
CI01000304_14265881_14269102 NA other downstream 1220238 14265476 ~ 14269571 (-)
G427309 NA other downstream 1281510 14181932 ~ 14237078 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other upstream 1289350 16769417 ~ 16780398 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other upstream 1364551 16854565 ~ 16860911 (-)
G429331 NA other upstream 2433849 17923863 ~ 17924684 (-)
G429499 NA other upstream 2747705 18237719 ~ 18238319 (-)
G429673 NA other upstream 3096428 18586442 ~ 18591856 (-)

Expression


Co-expression Network