Gene
RNA
| Item | Value |
|---|---|
| gene id | G427894 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 15994496 ~ 15996274 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU491324 | True | 1520 | lncRNA | 0.37 | 2 | 15994496 | 15996274 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_15964692_15966904 | NA | coding | upstream | 27003 | 15963916 ~ 15967493 (+) |
| CI01000304_15896045_15897082 | NA | coding | upstream | 96653 | 15896045 ~ 15897843 (+) |
| CI01000304_15817532_15846675 | PPM1E | coding | upstream | 147604 | 15814649 ~ 15846892 (+) |
| CI01000304_15785399_15786785 | RAD51C | coding | upstream | 207468 | 15785399 ~ 15787028 (+) |
| CI01000304_15779082_15779951 | ZBTB21 | coding | upstream | 214391 | 15779082 ~ 15780105 (+) |
| CI01000304_16040037_16043960 | NA | coding | downstream | 43763 | 16040037 ~ 16043960 (+) |
| CI01000304_16109760_16122597 | NA | coding | downstream | 111104 | 16107378 ~ 16122874 (+) |
| CI01000304_16132778_16137222 | MDH2.S, MDH2, MDH2.L | coding | downstream | 135601 | 16131875 ~ 16137348 (+) |
| CI01000304_16138794_16144084 | NA | coding | downstream | 142520 | 16138794 ~ 16144237 (+) |
| CI01000304_16146512_16201457 | RYR1, RYR1A | coding | downstream | 149927 | 16146201 ~ 16202105 (+) |
| G427961 | NA | non-coding | upstream | 6886 | 15986575 ~ 15987610 (+) |
| G427872 | NA | non-coding | upstream | 49084 | 15883070 ~ 15945412 (+) |
| G427902 | NA | non-coding | upstream | 56394 | 15922179 ~ 15938102 (+) |
| G427889 | NA | non-coding | upstream | 62539 | 15866166 ~ 15931957 (+) |
| G427904 | NA | non-coding | upstream | 143360 | 15840911 ~ 15851136 (+) |
| G427855 | NA | non-coding | downstream | 71474 | 16067748 ~ 16068983 (+) |
| G428020 | NA | non-coding | downstream | 91795 | 16088069 ~ 16089172 (+) |
| G427864 | NA | non-coding | downstream | 95126 | 16091400 ~ 16097493 (+) |
| G428027 | NA | non-coding | downstream | 133433 | 16129707 ~ 16130080 (+) |
| G427868 | NA | non-coding | downstream | 222173 | 16218447 ~ 16219937 (+) |
| G427860 | NA | other | upstream | 104905 | 15885454 ~ 15889591 (+) |
| G426828 | NA | other | upstream | 1043904 | 14948890 ~ 14950592 (+) |
| G426312 | NA | other | upstream | 1663610 | 14330048 ~ 14330886 (+) |
| CI01000304_13578347_13595075 | NA | other | upstream | 2415649 | 13578049 ~ 13595097 (+) |
| G425718 | NA | other | upstream | 3555410 | 12436554 ~ 12436605 (+) |
| G428017 | NA | other | downstream | 86956 | 16083230 ~ 16083714 (+) |
| CI01000304_16505174_16506124 | NA | other | downstream | 508588 | 16504764 ~ 16513625 (+) |
| CI01000304_16761621_16764983 | EXOSC8 | other | downstream | 759672 | 16761372 ~ 16765057 (+) |
| CI01000304_17009769_17023302 | ZDHHC20, ZDHHC20A | other | downstream | 1014456 | 17009769 ~ 17023882 (+) |
| CI01000304_17315088_17315342 | NA | other | downstream | 1318564 | 17315087 ~ 17315600 (+) |
