G428017


Basic Information

Item Value
gene id G428017
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 16083230 ~ 16083714 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU491458
GGATAACATGCCATGTCACAAAGCTCAAATCATCTCAAACTGGTTTCATGAGTTCACTATACTCAAATGGCCTCCACAGTCACCAGATCTCAATCCAATACAGCACCTTTGGGGTGTGGTGGAACGGGAGATCATAGATGTGCAGCAGACAAATCTGCAGCAACTGCATGATGCTATCATGTCAATATGGACCAAAATCTCTGAGGAATGTTTTCAGAACCTTATTGAACCTACGCCACGAAGAATTAAGGCAGTTCTGAAGGCAAAAGGGGGTCCAACCCGGTACATATTATACATAAAATAACATCAAAAGGCTGAAAATTTCAATTAATAATCATTAATGACATTAGCTCCTACTTTACCTGACATTTCTTGCAACTGTATTTGTGATGTTCAGGATCGTTCTTCTCATCTTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU491458 True 419 TUCP 0.40 2 16083230 16083714

Neighbor

gene id symbol gene type direction distance location
CI01000304_16040037_16043960 NA coding upstream 39270 16040037 ~ 16043960 (+)
CI01000304_15964692_15966904 NA coding upstream 115737 15963916 ~ 15967493 (+)
CI01000304_15896045_15897082 NA coding upstream 185387 15896045 ~ 15897843 (+)
CI01000304_15817532_15846675 PPM1E coding upstream 236338 15814649 ~ 15846892 (+)
CI01000304_15785399_15786785 RAD51C coding upstream 296202 15785399 ~ 15787028 (+)
CI01000304_16109760_16122597 NA coding downstream 23664 16107378 ~ 16122874 (+)
CI01000304_16132778_16137222 MDH2.S, MDH2, MDH2.L coding downstream 48161 16131875 ~ 16137348 (+)
CI01000304_16138794_16144084 NA coding downstream 55080 16138794 ~ 16144237 (+)
CI01000304_16146512_16201457 RYR1, RYR1A coding downstream 62487 16146201 ~ 16202105 (+)
CI01000304_16228517_16231072 CUNH21ORF59, CSSA11H21ORF59, CLG07H21ORF59, C19H21ORF59, C10H21ORF59, CSGR11H21ORF59, CLG14H21ORF59, C16H21ORF59 coding downstream 144803 16228517 ~ 16231553 (+)
G427855 NA non-coding upstream 14247 16067748 ~ 16068983 (+)
G427894 NA non-coding upstream 86956 15994496 ~ 15996274 (+)
G427961 NA non-coding upstream 95620 15986575 ~ 15987610 (+)
G427872 NA non-coding upstream 137818 15883070 ~ 15945412 (+)
G427902 NA non-coding upstream 145128 15922179 ~ 15938102 (+)
G428020 NA non-coding downstream 4355 16088069 ~ 16089172 (+)
G427864 NA non-coding downstream 7686 16091400 ~ 16097493 (+)
G428027 NA non-coding downstream 45993 16129707 ~ 16130080 (+)
G427868 NA non-coding downstream 134733 16218447 ~ 16219937 (+)
G427866 NA non-coding downstream 136316 16220030 ~ 16220408 (+)
G427860 NA other upstream 193639 15885454 ~ 15889591 (+)
G426828 NA other upstream 1132638 14948890 ~ 14950592 (+)
G426312 NA other upstream 1752344 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 2504383 13578049 ~ 13595097 (+)
G425718 NA other upstream 3644144 12436554 ~ 12436605 (+)
CI01000304_16505174_16506124 NA other downstream 421148 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 672232 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 927016 17009769 ~ 17023882 (+)
CI01000304_17315088_17315342 NA other downstream 1231124 17315087 ~ 17315600 (+)
G429050 NA other downstream 1598557 17682271 ~ 17684763 (+)

Expression


Co-expression Network