G428069


Basic Information

Item Value
gene id G428069
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 16422747 ~ 16422949 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU491522
TATCAATTCTGCTGTTTGCCTATTTCTATTATTTCCGTTATTGTCGTTATTGCATCACGTCTCAAAAGCGCGTCTCGAGACCCTCGTGTTTTACGCTGCGCTTTTTTAAAAACCATTCCTGAGCGCTGCGTCTCGCGTTTTTAGACGCAAAGACGCGTTCTGTGTGAATGGTCCCTTACACGTTTTGTCTATCAAGATAATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU491522 True 203 lncRNA 0.43 1 16422747 16422949

Neighbor

gene id symbol gene type direction distance location
CI01000304_16406577_16413911 KL coding upstream 8524 16406067 ~ 16414223 (+)
CI01000304_16370076_16401491 FRY, FRYB coding upstream 21133 16369970 ~ 16401614 (+)
CI01000304_16358266_16367985 FRY, FRYB coding upstream 54407 16358266 ~ 16368340 (+)
CI01000304_16347460_16350144 NA coding upstream 72562 16346776 ~ 16350185 (+)
CI01000304_16315830_16336387 RXFP2A coding upstream 85819 16315168 ~ 16336928 (+)
CI01000304_16433456_16438415 NA coding downstream 9480 16432429 ~ 16438531 (+)
CI01000304_16458657_16462430 NA coding downstream 35571 16458520 ~ 16463023 (+)
CI01000304_16470293_16490666 STARD13, STARD13A coding downstream 47304 16470253 ~ 16492041 (+)
CI01000304_16505174_16506124 NA coding downstream 81815 16504764 ~ 16513625 (+)
CI01000304_16565077_16641637 NBEA, NBEAA coding downstream 142128 16565077 ~ 16642341 (+)
G427866 NA non-coding upstream 202339 16220030 ~ 16220408 (+)
G427868 NA non-coding upstream 202810 16218447 ~ 16219937 (+)
G428027 NA non-coding upstream 292667 16129707 ~ 16130080 (+)
G427864 NA non-coding upstream 325254 16091400 ~ 16097493 (+)
G428020 NA non-coding upstream 333575 16088069 ~ 16089172 (+)
G428099 NA non-coding downstream 52273 16475222 ~ 16555622 (+)
G428116 NA non-coding downstream 226943 16649892 ~ 16654939 (+)
G428188 NA non-coding downstream 308658 16731607 ~ 16731828 (+)
G428197 NA non-coding downstream 356414 16779363 ~ 16780995 (+)
G428201 NA non-coding downstream 369344 16792293 ~ 16792623 (+)
G428017 NA other upstream 339033 16083230 ~ 16083714 (+)
G427860 NA other upstream 533156 15885454 ~ 15889591 (+)
G426828 NA other upstream 1472155 14948890 ~ 14950592 (+)
G426312 NA other upstream 2091861 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 2843900 13578049 ~ 13595097 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 332997 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 587781 17009769 ~ 17023882 (+)
CI01000304_17315088_17315342 NA other downstream 891889 17315087 ~ 17315600 (+)
G429050 NA other downstream 1259322 17682271 ~ 17684763 (+)

Expression


Co-expression Network