G428099


Basic Information

Item Value
gene id G428099
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 16475222 ~ 16555622 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU491564
TATATATATATATATATATATATATATATATGTATATATATATAACATGTATGTATGCATGGGTGTGTTGTATTATTCATTTTTTGTTTACAGGTTCTTTACTTCTGAATTGCTAAATTTTACTTATTTTACTATTAAGCATTCTTAAATGTGGAAGGGAAAATGCATTGAGCATATGACTCTTTCCCATATGTCTTTTGTCCCTCATTGTCATTCGTGGTGCTTCTGCAGGAAGTTAGTCTCAAGACAAGCGTGTTTGTTTATTATTAAAGCTGTCACTCCACTGACAGCTGTCCTCTCAGCATGGCGTTTCTTGTTTACACACAAATTCTGTATTCCTCCCTCTCCGATGATTTATCAACGTTCAAGTTTATTCATTCAGAATGCCTCATTAAATCACCTTCCTCTGGCATCTTTTTGTATCTCTGAAGTCGCCCGTCCTGCTGAGCTGAAATTACATATTCTTTCCGCAGAGTGCGTCCTACTGACTCTAAGTCACCACTTTCAGTCATGCCTATCTCTCTAGTCTCTCTCATTACTCTGTCCCAGCCTTCCAAACATAGATATCAAACAGCCTTCTCTATCGAAATTCTCTTCCCATTTCCAAAAGCCTTGTGTTCCACCTATAGGGTCCAGCCAAGGAAAGTCGTGTGAGGGGGAGGACTGCTCCCTTGGAGAATTTACATTGAACGCCTAACCCAGAGAAATAGATTGATGACCTTTGTGGCAGGCTGTGATGAAGAGAGGGTGACCTGGTGTGATGAGGCCGTGGCGGGGAAGCCGCAATCGCGAACGGCGCATTATGTGAAATAACAAATACATTCTGCGAGTGGCCAAGAGGGAGAGTGTGTTAAACCAAAACAGCTGCACTGCACAACAGATGGTAAGGCCGCAGTAATCCTTCTAAGATCTCAAGTGCAAGCAATTGAAAACCGCAATGAGAAAACTGAATCTGAAAATGAGTGGCCTCGCGGTGACTGCTCTGCTGAAGGATATCTCCCAGCCACAGCACAAGTAAACAAACTCGGATAAGACTTCCAGACTAGCAGAAGATAACTCACTCTGATCTGTAATGTTTACAACCTCATTATTTTTGCTTTTCCTACTTTAGAAATACTTGTTGTTTGAACTTGCTCCTCTGCTAGAGCTACCAAATGGAAAACTGACAACTTAAGAATATTGATGTGAGGATTACGGTATTTTTCCGAGATTAGACGGTCCCTCGGTTTACCATACTGTCATAAACATGCCACATCTTATTATTAAGTGGCGCATCTCTGTCATCATTTCATAAAACTGTCTTCATAAAGGGATAGTTAAAATTCTGACATCATTTACTCACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU491564 True 1344 lncRNA 0.41 2 16475222 16555622

Neighbor

gene id symbol gene type direction distance location
CI01000304_16458657_16462430 NA coding upstream 12199 16458520 ~ 16463023 (+)
CI01000304_16433456_16438415 NA coding upstream 36691 16432429 ~ 16438531 (+)
CI01000304_16406577_16413911 KL coding upstream 60999 16406067 ~ 16414223 (+)
CI01000304_16370076_16401491 FRY, FRYB coding upstream 73608 16369970 ~ 16401614 (+)
CI01000304_16358266_16367985 FRY, FRYB coding upstream 106882 16358266 ~ 16368340 (+)
CI01000304_16565077_16641637 NBEA, NBEAA coding downstream 9455 16565077 ~ 16642341 (+)
CI01000304_16740135_16740524 SERTM1 coding downstream 183224 16738846 ~ 16740995 (+)
CI01000304_16743239_16743811 RFXAP coding downstream 186881 16742503 ~ 16743811 (+)
CI01000304_16761621_16764983 EXOSC8 coding downstream 205999 16761372 ~ 16765057 (+)
CI01000304_16830439_16835774 NSUN5 coding downstream 274817 16830439 ~ 16836287 (+)
G428069 NA non-coding upstream 52273 16422747 ~ 16422949 (+)
G427866 NA non-coding upstream 254814 16220030 ~ 16220408 (+)
G427868 NA non-coding upstream 255285 16218447 ~ 16219937 (+)
G428027 NA non-coding upstream 345142 16129707 ~ 16130080 (+)
G427864 NA non-coding upstream 377729 16091400 ~ 16097493 (+)
G428116 NA non-coding downstream 94270 16649892 ~ 16654939 (+)
G428188 NA non-coding downstream 175985 16731607 ~ 16731828 (+)
G428197 NA non-coding downstream 223741 16779363 ~ 16780995 (+)
G428201 NA non-coding downstream 236671 16792293 ~ 16792623 (+)
G428232 NA non-coding downstream 297928 16853550 ~ 16853767 (+)
G428017 NA other upstream 391508 16083230 ~ 16083714 (+)
G427860 NA other upstream 585631 15885454 ~ 15889591 (+)
G426828 NA other upstream 1524630 14948890 ~ 14950592 (+)
G426312 NA other upstream 2144336 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 2896375 13578049 ~ 13595097 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 455108 17009769 ~ 17023882 (+)
CI01000304_17315088_17315342 NA other downstream 759216 17315087 ~ 17315600 (+)
G429050 NA other downstream 1126649 17682271 ~ 17684763 (+)
CI01000304_17698564_17703891 NA other downstream 1147688 17698467 ~ 17704096 (+)

Expression


Co-expression Network