Gene
RNA
| Item | Value |
|---|---|
| gene id | G428710 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 16879069 ~ 16879279 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU492248 | True | 211 | lncRNA | 0.34 | 1 | 16879069 | 16879279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_16874485_16876468 | NA | coding | downstream | 2601 | 16874275 ~ 16876468 (-) |
| CI01000304_16868092_16872772 | SMG8 | coding | downstream | 6297 | 16867882 ~ 16872772 (-) |
| CI01000304_16854877_16860888 | YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC | coding | downstream | 18181 | 16854565 ~ 16860911 (-) |
| CI01000304_16838208_16848663 | POM121C, POM121 | coding | downstream | 29990 | 16837747 ~ 16849079 (-) |
| CI01000304_16816039_16828777 | RIPK4 | coding | downstream | 50069 | 16815450 ~ 16829000 (-) |
| CI01000304_16902774_16907628 | RHBDD2 | coding | upstream | 22821 | 16902100 ~ 16908819 (-) |
| CI01000304_16929873_16945323 | GABRR3A, GABRR3 | coding | upstream | 50169 | 16929448 ~ 16946827 (-) |
| CI01000304_17003708_17006278 | NA | coding | upstream | 124086 | 17003365 ~ 17006383 (-) |
| CI01000304_17026143_17041443 | NA | coding | upstream | 146787 | 17026066 ~ 17041536 (-) |
| CI01000304_17067366_17070132 | OVCA2 | coding | upstream | 188051 | 17067330 ~ 17070132 (-) |
| G428707 | NA | non-coding | downstream | 66602 | 16812184 ~ 16812467 (-) |
| G428681 | NA | non-coding | downstream | 270055 | 16603550 ~ 16609014 (-) |
| G428638 | NA | non-coding | downstream | 284560 | 16587475 ~ 16594509 (-) |
| G428547 | NA | non-coding | downstream | 598548 | 16280266 ~ 16280521 (-) |
| G428502 | NA | non-coding | downstream | 658656 | 16220029 ~ 16220413 (-) |
| G428662 | NA | non-coding | upstream | 7175 | 16886454 ~ 16886952 (-) |
| G428713 | NA | non-coding | upstream | 35530 | 16914809 ~ 16916803 (-) |
| G428729 | NA | non-coding | upstream | 71922 | 16951201 ~ 16955072 (-) |
| G428735 | NA | non-coding | upstream | 81820 | 16961099 ~ 16961332 (-) |
| G428760 | NA | non-coding | upstream | 131500 | 17010779 ~ 17012964 (-) |
| CI01000304_16769537_16780398 | SUPT20, SUPT20H | other | downstream | 98110 | 16769417 ~ 16780398 (-) |
| G427376 | NA | other | downstream | 1617664 | 15258964 ~ 15261405 (-) |
| G427423 | NA | other | downstream | 2517177 | 14361448 ~ 14361892 (-) |
| CI01000304_14286960_14294449 | NA | other | downstream | 2591465 | 14286960 ~ 14294449 (-) |
| G429331 | NA | other | upstream | 1044584 | 17923863 ~ 17924684 (-) |
| G429499 | NA | other | upstream | 1358440 | 18237719 ~ 18238319 (-) |
| G429673 | NA | other | upstream | 1707163 | 18586442 ~ 18591856 (-) |
