G428662


Basic Information

Item Value
gene id G428662
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 16886454 ~ 16886952 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU492192
TGATATTCTGATGTCATGACTTTCATTGACATATGGTGTGAAAAACGTCATAGCATTTTAGTTAATAAAATAAAAACAAAATAATAAATATTTATATTTTAGGTTTAAGGGAAAGACATTTCATCCATTATCCTGTGACACATTTACAAAAATCCTCACTTAGCAAGATTAAACCATAAACAGAAGAAACACTTATCTGACAACATTTAAGCAATAGTGTCATAAAAATGTTGTACATTATTAAATCAATAATCCCATACACAGACATTTAAAAAAAACATTAATATAAAACATAAATTGCTTTGATAAAGAGTTCAGTGTCTTTGTGCCAGTCATTTATAAAGCTTTAGCTTTGTCCTGATCCATGTATTTGTGGTAAACAACACCAAGAGTAGTGAAGAAGTTTCCCATGAACAAAACAAGGAAAGTAGAGCCACACATAAGAACCTGAAAAGAAAAA
>TU492193
TGATATTCTGATGTCATGACTTTCATTGACATATGGTGTGAAAAACGTCATAGCATTTTAGTTAATAAAATAAAAACAAAATAATAAATATTTATATTTTAGGTTTAAGGGAAAGACATTTCATCCATTATCCTGTGACACATTTACAAAAATCCTCACTTAGCAAGATTAAACCATAAACAGAAGAAACACTTATCTGACAACATTTAAGCAATAGTGTCATAAAAATGTTGTACATTATTAAATCAATAATCCCATACACAGACATTTAAAAAAACATTAATATAAAACATAAATTGCTTTGATAAAGAGTTCAGTGTCTTTGTGCCAGTCATTTATAAAGCTTTAGCTTTGTCCTGATCCATGTATTTGTGGTAAACAACACCAAGAGTAGTGAAGAAGTTTCCCATGAACAAAACAAGGAAAGTAGAGCCACACATAAGAACCTGAAAAGAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU492192 False 460 lncRNA 0.29 2 16886454 16886952
TU492193 True 459 lncRNA 0.29 2 16886454 16886952

Neighbor

gene id symbol gene type direction distance location
CI01000304_16874485_16876468 NA coding downstream 9986 16874275 ~ 16876468 (-)
CI01000304_16868092_16872772 SMG8 coding downstream 13682 16867882 ~ 16872772 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC coding downstream 25566 16854565 ~ 16860911 (-)
CI01000304_16838208_16848663 POM121C, POM121 coding downstream 37375 16837747 ~ 16849079 (-)
CI01000304_16816039_16828777 RIPK4 coding downstream 57454 16815450 ~ 16829000 (-)
CI01000304_16902774_16907628 RHBDD2 coding upstream 15148 16902100 ~ 16908819 (-)
CI01000304_16929873_16945323 GABRR3A, GABRR3 coding upstream 42496 16929448 ~ 16946827 (-)
CI01000304_17003708_17006278 NA coding upstream 116413 17003365 ~ 17006383 (-)
CI01000304_17026143_17041443 NA coding upstream 139114 17026066 ~ 17041536 (-)
CI01000304_17067366_17070132 OVCA2 coding upstream 180378 17067330 ~ 17070132 (-)
G428710 NA non-coding downstream 7175 16879069 ~ 16879279 (-)
G428707 NA non-coding downstream 73987 16812184 ~ 16812467 (-)
G428681 NA non-coding downstream 277440 16603550 ~ 16609014 (-)
G428638 NA non-coding downstream 291945 16587475 ~ 16594509 (-)
G428547 NA non-coding downstream 605933 16280266 ~ 16280521 (-)
G428713 NA non-coding upstream 27857 16914809 ~ 16916803 (-)
G428729 NA non-coding upstream 64249 16951201 ~ 16955072 (-)
G428735 NA non-coding upstream 74147 16961099 ~ 16961332 (-)
G428760 NA non-coding upstream 123827 17010779 ~ 17012964 (-)
G428721 NA non-coding upstream 137116 17024068 ~ 17025288 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other downstream 105495 16769417 ~ 16780398 (-)
G427376 NA other downstream 1625049 15258964 ~ 15261405 (-)
G427423 NA other downstream 2524562 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 2598850 14286960 ~ 14294449 (-)
G429331 NA other upstream 1036911 17923863 ~ 17924684 (-)
G429499 NA other upstream 1350767 18237719 ~ 18238319 (-)
G429673 NA other upstream 1699490 18586442 ~ 18591856 (-)

Expression


Co-expression Network