G428721


Basic Information

Item Value
gene id G428721
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17024068 ~ 17025288 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU492263
TGCCAAAATGTTTTTTATTAATTCTTAATTTATAATGCATACATTGAATACTTGGTAAATCGTAAAGTACAAACATTAAATTGAATTAGACATGGAAAATCTGTGCAAACTGTTCAGACTTCAGAAACATCTTCAAATATAACATGAACCAAACTGGCCTGCAGGGTAAGTACAAAAAAAGCTAAAAAAAATTGTACAAGTCTTTTTTTTTTTTTTTGGAAAGAATACAAATCAGAAAATGAAAATGGTCCTAGTTTGGTTTTCAAATTCCAGTATTATATTACATATTCATGAGCGAGTAAGTGATTGATTAGTGAGTTCTTTGATATTAAAATGATTATTTTTGGCATAATCACTGTCCTATAAAAATGTTTATAAAGACGACCATGTTCTTTTACAAATACCACATGACCTCCAGCAGATGTAGCAGCCTAATTATTTTTGATGTTGCTATGGTTATGTCAGCTCAAGTTCTGCAGAAATGCTATCTAGAGGTCATAATTATAGTGGTAAATCATTGCCCCTTTATCCAGGTCATTTTCATATTAACATGCAATAACATAAATAGAAAATTCTGAAAAACTATAATAAAAAAACAATATGCAACCTGTTCAGCACAACCAATTCAATGACTTCCATGAACATCAGCTCTGAAATGAGTTTCATGGACAAAGTATTAACACTCAAGCAGAGATATGCATGTATTTCAGTCACATAAGAGCTTCCTTATGAGGTCACGTTTCTCCAGGAATAAATGGAGACAGTGCATCTGTAAACAGATCTCGCTGAACTCCTCCTCCCACTTACAGAACAGCAGAAACAAAACTATACAAACAAAAAACTGTACACCAAGATTACACATTCACGTGGAGTAAAAACTTCAGCTGTCATCAAACTTAAATTAATGAAATTTTCTAGAATCCATTTTGCCACATTTGCTGCAGCTGGCAAAAGTTTAATGTCTTGGCCTGAGCTCTTTCTGTAATAAACAACTGAGCTGTTGTTTACACAACCTAGAAATGTTAAGTGTGCTTTAATGACACGATTCACACCATCTGCTGCAAAATCTAACCCTCAAACAAAGGCACAAAGCTGATAGTATAATGCTGATGGGCTTGAGGAATTTAAAGGAACAAAAAGAGTGAAAAATTAAAGAGATAGTTCACCCAAAAATGAAAATTCTGTCATCATTTACTCACCCTCAAGTTGTTCCAAACCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU492263 True 1221 lncRNA 0.33 1 17024068 17025288

Neighbor

gene id symbol gene type direction distance location
CI01000304_17003708_17006278 NA coding downstream 17685 17003365 ~ 17006383 (-)
CI01000304_16929873_16945323 GABRR3A, GABRR3 coding downstream 77241 16929448 ~ 16946827 (-)
CI01000304_16902774_16907628 RHBDD2 coding downstream 115249 16902100 ~ 16908819 (-)
CI01000304_16874485_16876468 NA coding downstream 147600 16874275 ~ 16876468 (-)
CI01000304_16868092_16872772 SMG8 coding downstream 151296 16867882 ~ 16872772 (-)
CI01000304_17026143_17041443 NA coding upstream 778 17026066 ~ 17041536 (-)
CI01000304_17067366_17070132 OVCA2 coding upstream 42042 17067330 ~ 17070132 (-)
CI01000304_17318429_17320775 OR109-13 coding upstream 293136 17318424 ~ 17320898 (-)
CI01000304_17332233_17338077 NA coding upstream 306945 17332233 ~ 17338077 (-)
CI01000304_17348461_17354382 NA coding upstream 322791 17348079 ~ 17354622 (-)
G428760 NA non-coding downstream 11104 17010779 ~ 17012964 (-)
G428735 NA non-coding downstream 62736 16961099 ~ 16961332 (-)
G428729 NA non-coding downstream 68996 16951201 ~ 16955072 (-)
G428713 NA non-coding downstream 107265 16914809 ~ 16916803 (-)
G428662 NA non-coding downstream 137116 16886454 ~ 16886952 (-)
G428726 NA non-coding upstream 29240 17054528 ~ 17056441 (-)
G428724 NA non-coding upstream 32697 17057985 ~ 17059153 (-)
G428763 NA non-coding upstream 36562 17061850 ~ 17062111 (-)
G428807 NA non-coding upstream 96304 17121592 ~ 17147286 (-)
G428816 NA non-coding upstream 110845 17136133 ~ 17136684 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other downstream 156830 16854565 ~ 16860911 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other downstream 243109 16769417 ~ 16780398 (-)
G427376 NA other downstream 1762663 15258964 ~ 15261405 (-)
G427423 NA other downstream 2662176 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 2736464 14286960 ~ 14294449 (-)
G429331 NA other upstream 898575 17923863 ~ 17924684 (-)
G429499 NA other upstream 1212431 18237719 ~ 18238319 (-)
G429673 NA other upstream 1561154 18586442 ~ 18591856 (-)

Expression


Co-expression Network