G428807


Basic Information

Item Value
gene id G428807
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17121592 ~ 17147286 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU492351
CTGCTTGTTAGAGCGTCTGACTCCCACGCTGGAGACCCAGGTTCAAGGCCAGTGCAGAGCAGGGCGAGTAGGACCTGGGTGAGAGGTTACATTGGTGCCGCGACCCGGATGGGAGTGAGGTTTAGGGGGGTGAGTGTAACGGAGGCCAGGTTGCTGTGCAAGTAAACCTCACTCCTCTGATCTCAAGAGATGCTCTAGCGACTAGGTTACATTGGTGCCGTGACCCGGATGGGAGTGAGGTTTAGGGGGTTGAGTGTAACGGAGGCCAGCTAGTAGTCGCTGTATGAGTAAACCTTACTCCACTGATCTCAAGAGATGCTCTAGCGACTGACGTTAGAGGTCGCAGCCTTTAGCCTCCTTGTTAGAGCATCCGACTCCCATGCCGGAGACCCAGGTTCGAGGCCTCTGCAGAGCGGGGCAAGTAGGACCTGGGTAGAGGGGTTACACACGCACACACAGGGTCATAGCTGTGGTATCCGGGGCCACGATGCAGGTTGTTGCTTTGGGCCCCCTAGAATGGTCACCACCCTTTCTTTGCCTGTTAGCAACGGCCCTATATATAAAAGTCTTACACTTTTATTGACGCCTGTTGATGCCTCATTACACTAAAACAAACGTTTTTAATTACAAATGCCATTTTTCGCTTATATTCAGTTATACTGCAACAGAATAACCTGTTGTTCTGACATACTGTAGCATAAAAAGGCCATTGATATGAGTCTTTTATCATATTAATCATATTCGTTGAAACACTTCTCATATATTTGTGGGAAAAACTAGAAGAAAAAATGACTTGGTGCACTTTTAAACTAAACCTACACTAGAACCATTCTTGACCCAGACTCTTGGGGGAAAGCTCTGATGCGATTGGTCAATTCAGTGCCTCACATCTGTATTATTCAGGGCCCCTGTCCTTTCTGTCTTCTTCATAGGACATATATGAACCTACTGACAGGGGTACAAAGGACCTCAGCCGAGTTAGACCTCAGGGTGGACTTTCTCCAGTGGCCCAGAGTGTATAAATCTTTAATCACATCCCCCCATGCCTTTCCATGACAGACCAGAGGGCTCAGTCTGTCTCTGCATTATTCAGAAGGACCCACAGAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU492351 True 1110 lncRNA 0.48 2 17121592 17147286

Neighbor

gene id symbol gene type direction distance location
CI01000304_17067366_17070132 OVCA2 coding downstream 51460 17067330 ~ 17070132 (-)
CI01000304_17026143_17041443 NA coding downstream 80056 17026066 ~ 17041536 (-)
CI01000304_17003708_17006278 NA coding downstream 115209 17003365 ~ 17006383 (-)
CI01000304_16929873_16945323 GABRR3A, GABRR3 coding downstream 174765 16929448 ~ 16946827 (-)
CI01000304_16902774_16907628 RHBDD2 coding downstream 212773 16902100 ~ 16908819 (-)
CI01000304_17318429_17320775 OR109-13 coding upstream 171138 17318424 ~ 17320898 (-)
CI01000304_17332233_17338077 NA coding upstream 184947 17332233 ~ 17338077 (-)
CI01000304_17348461_17354382 NA coding upstream 200793 17348079 ~ 17354622 (-)
CI01000304_17369357_17411120 NA coding upstream 221868 17369154 ~ 17411203 (-)
CI01000304_17413669_17414667 OR109-1 coding upstream 266228 17413514 ~ 17414908 (-)
G428763 NA non-coding downstream 59481 17061850 ~ 17062111 (-)
G428724 NA non-coding downstream 62439 17057985 ~ 17059153 (-)
G428726 NA non-coding downstream 65151 17054528 ~ 17056441 (-)
G428721 NA non-coding downstream 96304 17024068 ~ 17025288 (-)
G428760 NA non-coding downstream 108628 17010779 ~ 17012964 (-)
G428837 NA non-coding upstream 22045 17169331 ~ 17216801 (-)
G428859 NA non-coding upstream 72461 17219747 ~ 17220001 (-)
G428860 NA non-coding upstream 78292 17225578 ~ 17225877 (-)
G428863 NA non-coding upstream 88156 17235442 ~ 17235696 (-)
G428909 NA non-coding upstream 168994 17316280 ~ 17316481 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other downstream 254354 16854565 ~ 16860911 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other downstream 340633 16769417 ~ 16780398 (-)
G427376 NA other downstream 1860187 15258964 ~ 15261405 (-)
G427423 NA other downstream 2759700 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 2833988 14286960 ~ 14294449 (-)
G429331 NA other upstream 776577 17923863 ~ 17924684 (-)
G429499 NA other upstream 1090433 18237719 ~ 18238319 (-)
G429673 NA other upstream 1439156 18586442 ~ 18591856 (-)

Expression


Co-expression Network