G429266


Basic Information

Item Value
gene id G429266
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17523382 ~ 17523715 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU492874
GCCAGAGACACTGATGTTATGCTGCATATTTTATTTAAAGGCAGTAATTGTGTAGTTACTGATGCAGTGATACAGTAGTTGCATTAACTTGATCATGTGCTGTTGTCAGCTAATGTCTTACTGCAAGAGATTTGCATTTTAAAGAAAAGGTTTCATAATAATCCAAGAAACACCTGTAAAGAACTTTTTTTTTTTTTTTTGTAAAACATTTAAGAAAAACTTGTTTTTGTTTTAACAGCCACTTTTGTTAGTCAATTTAGCTCTAATTTTCACTTAAATTTTTGACAAGGGCAGCAGGGACGTTCTGAGAACATTTCTAAATAAAGTATGGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU492874 True 334 lncRNA 0.32 1 17523382 17523715

Neighbor

gene id symbol gene type direction distance location
CI01000304_17488992_17490128 NA coding downstream 32888 17488124 ~ 17490494 (-)
CI01000304_17413669_17414667 OR109-1 coding downstream 108474 17413514 ~ 17414908 (-)
CI01000304_17369357_17411120 NA coding downstream 112179 17369154 ~ 17411203 (-)
CI01000304_17348461_17354382 NA coding downstream 168760 17348079 ~ 17354622 (-)
CI01000304_17332233_17338077 NA coding downstream 185305 17332233 ~ 17338077 (-)
CI01000304_17538160_17540583 UBL3A, UBL3.S, UBL3 coding upstream 14445 17538160 ~ 17540583 (-)
CI01000304_17571701_17576895 KATNAL1 coding upstream 47509 17571224 ~ 17576895 (-)
CI01000304_17579139_17581078 NA coding upstream 55403 17579118 ~ 17581601 (-)
CI01000304_17582446_17582872 NA coding upstream 58529 17582244 ~ 17582872 (-)
CI01000304_17584110_17585466 HMGB1B, HMGB1, HMGB1A coding upstream 60145 17583860 ~ 17585669 (-)
G429172 NA non-coding downstream 163290 17344902 ~ 17360092 (-)
G428912 NA non-coding downstream 199827 17323213 ~ 17323555 (-)
G428909 NA non-coding downstream 206901 17316280 ~ 17316481 (-)
G428863 NA non-coding downstream 287686 17235442 ~ 17235696 (-)
G428860 NA non-coding downstream 297505 17225578 ~ 17225877 (-)
G429216 NA non-coding upstream 5603 17529318 ~ 17529711 (-)
G429238 NA non-coding upstream 40385 17564100 ~ 17564398 (-)
G429220 NA non-coding upstream 41987 17565702 ~ 17568817 (-)
G429202 NA non-coding upstream 136159 17659874 ~ 17704143 (-)
G429224 NA non-coding upstream 195231 17718946 ~ 17794447 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other downstream 656144 16854565 ~ 16860911 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other downstream 742423 16769417 ~ 16780398 (-)
G427376 NA other downstream 2261977 15258964 ~ 15261405 (-)
G427423 NA other downstream 3161490 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 3235778 14286960 ~ 14294449 (-)
G429331 NA other upstream 400148 17923863 ~ 17924684 (-)
G429499 NA other upstream 714004 18237719 ~ 18238319 (-)
G429673 NA other upstream 1062727 18586442 ~ 18591856 (-)

Expression


Co-expression Network