G429238


Basic Information

Item Value
gene id G429238
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17564100 ~ 17564398 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU492845
TATTCTCCTACATCACTGGACAGAACTGTCATTTCTGGGCTGCAGGCCATAATCAGGCAGAGCTAGAATTCAAATCACATGGGTCTCCCTCTCATCAGACCAACATGTTCTGCTCTGTCCGGCTGCTCTGACATTGTTAGTGAGATACAGGATATCCCTGAAGGGGAGAGACAGCTAAACAATATCAGACCTAATCAACATTGTTTGTTAACAAACAGTAAGCCAGACATCCTTCTCGATGATATAACACCCCACGCCCAACAGACATAAACAGTACGCCGTGAGCCCCCAGGCTACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU492845 True 299 lncRNA 0.46 1 17564100 17564398

Neighbor

gene id symbol gene type direction distance location
CI01000304_17538160_17540583 UBL3A, UBL3.S, UBL3 coding downstream 23517 17538160 ~ 17540583 (-)
CI01000304_17488992_17490128 NA coding downstream 73606 17488124 ~ 17490494 (-)
CI01000304_17413669_17414667 OR109-1 coding downstream 149192 17413514 ~ 17414908 (-)
CI01000304_17369357_17411120 NA coding downstream 152897 17369154 ~ 17411203 (-)
CI01000304_17348461_17354382 NA coding downstream 209478 17348079 ~ 17354622 (-)
CI01000304_17571701_17576895 KATNAL1 coding upstream 6826 17571224 ~ 17576895 (-)
CI01000304_17579139_17581078 NA coding upstream 14720 17579118 ~ 17581601 (-)
CI01000304_17582446_17582872 NA coding upstream 17846 17582244 ~ 17582872 (-)
CI01000304_17584110_17585466 HMGB1B, HMGB1, HMGB1A coding upstream 19462 17583860 ~ 17585669 (-)
CI01000304_17609266_17610594 MEDAG coding upstream 44845 17609243 ~ 17610594 (-)
G429216 NA non-coding downstream 34389 17529318 ~ 17529711 (-)
G429266 NA non-coding downstream 40385 17523382 ~ 17523715 (-)
G429172 NA non-coding downstream 204008 17344902 ~ 17360092 (-)
G428912 NA non-coding downstream 240545 17323213 ~ 17323555 (-)
G428909 NA non-coding downstream 247619 17316280 ~ 17316481 (-)
G429220 NA non-coding upstream 1304 17565702 ~ 17568817 (-)
G429202 NA non-coding upstream 95476 17659874 ~ 17704143 (-)
G429224 NA non-coding upstream 154548 17718946 ~ 17794447 (-)
G429300 NA non-coding upstream 256362 17820760 ~ 17821223 (-)
G429301 NA non-coding upstream 257761 17822159 ~ 17822403 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other downstream 696862 16854565 ~ 16860911 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other downstream 783141 16769417 ~ 16780398 (-)
G427376 NA other downstream 2302695 15258964 ~ 15261405 (-)
G427423 NA other downstream 3202208 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 3276496 14286960 ~ 14294449 (-)
G429331 NA other upstream 359465 17923863 ~ 17924684 (-)
G429499 NA other upstream 673321 18237719 ~ 18238319 (-)
G429673 NA other upstream 1022044 18586442 ~ 18591856 (-)

Expression


Co-expression Network