G429224


Basic Information

Item Value
gene id G429224
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17718946 ~ 17794447 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU492831
GATCGCATATCAAACTGCCAAAGTCACGTGAACTATTGAAATTTCGAAACACTTATGACGTAACGAAGCCTGGTTTACTGAAATCATGTGACTTTGGCAGTTTGATACACGCTCCGAACCACTGATTCGAAACAAAAGATTCGTAAAGCTTCAAAGCTTCATGAAGCAGTGTTTTAAAATCGCCCATCACTAGATATTGTTGAATAAAGTCGTTATTTTGTTTTTTTGGTGCACCAAAAATATTCTCATCACTTTATAATATTAATATTGAACCACTGTACTCACATGAACTGATTTAAATATGTTTTTAGTACATTAATGGCTCTTGAGAGAGGAAATGTAATTGCTGGCTATGGAGGCCTCACTGAGCCATCGGATTTCAACAAAAATATCTTAATTTGCGTTCCGAAGATGAACGAAGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU492831 True 425 lncRNA 0.36 3 17718946 17794447

Neighbor

gene id symbol gene type direction distance location
CI01000304_17705069_17711334 DNAJB13 coding downstream 6479 17705033 ~ 17712467 (-)
CI01000304_17673830_17688501 RSF1B.1 coding downstream 30445 17671998 ~ 17688501 (-)
CI01000304_17652862_17661953 SLC1A3A, SLC1A3B, SLC1A3 coding downstream 56694 17651127 ~ 17662252 (-)
CI01000304_17614848_17642103 NIPBLB, NIPBL coding downstream 76843 17614725 ~ 17642103 (-)
CI01000304_17613042_17613658 NA coding downstream 104893 17612666 ~ 17614053 (-)
CI01000304_17837247_17882808 MYO18AA coding upstream 42800 17837247 ~ 17883960 (-)
CI01000304_18007357_18007779 NA coding upstream 212608 18007055 ~ 18008022 (-)
CI01000304_18010568_18011800 NA coding upstream 215807 18010254 ~ 18011834 (-)
CI01000304_18018841_18019759 NA coding upstream 224394 18018841 ~ 18020494 (-)
CI01000304_18021327_18022049 NA coding upstream 226604 18021051 ~ 18022109 (-)
G429202 NA non-coding downstream 14803 17659874 ~ 17704143 (-)
G429220 NA non-coding downstream 150129 17565702 ~ 17568817 (-)
G429238 NA non-coding downstream 154548 17564100 ~ 17564398 (-)
G429216 NA non-coding downstream 189235 17529318 ~ 17529711 (-)
G429266 NA non-coding downstream 195231 17523382 ~ 17523715 (-)
G429300 NA non-coding upstream 26313 17820760 ~ 17821223 (-)
G429301 NA non-coding upstream 27712 17822159 ~ 17822403 (-)
G429303 NA non-coding upstream 30995 17825442 ~ 17825664 (-)
G429305 NA non-coding upstream 33554 17828001 ~ 17828552 (-)
G429316 NA non-coding upstream 105219 17899666 ~ 17899895 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other downstream 851708 16854565 ~ 16860911 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other downstream 937987 16769417 ~ 16780398 (-)
G427376 NA other downstream 2457541 15258964 ~ 15261405 (-)
G427423 NA other downstream 3357054 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 3431342 14286960 ~ 14294449 (-)
G429331 NA other upstream 129416 17923863 ~ 17924684 (-)
G429499 NA other upstream 443272 18237719 ~ 18238319 (-)
G429673 NA other upstream 791995 18586442 ~ 18591856 (-)

Expression


Co-expression Network