G429381



Basic Information


Item Value
gene id G429381
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 18035487 ~ 18035987 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU493002
CAAACCTCCAGAGTCCATTGAACCCAAAAGCTGTGGAGGATGATTTTTACAGCTTCTCATCAGACTCTGGCAATCATACTTAAGAGTCCCTTATCTACCCATCAGTCTGTGACATTTACAAATCAGGCTTTCACATGCTCTCATCAGACTGGCATTCACAGATCAAACTCTCACATCCACTGATCCTGCATTGGTCAAACTGTAGGATGTTTGGTATTGAGGTGGTGACTCTTCATGATAAACTACACTCTGCAAAATTCCATGGACTGGGTTCAGAAGATTTGGGTCCTGACACAGTGACAACAAAGTATTAATCTTTGAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU493002 True 323 lncRNA 0.42 3 18035487 18035987

Neighbor


gene id symbol gene type direction distance location
CI01000304_18021327_18022049 NA coding downstream 13378 18021051 ~ 18022109 (-)
CI01000304_18018841_18019759 NA coding downstream 14993 18018841 ~ 18020494 (-)
CI01000304_18010568_18011800 NA coding downstream 23653 18010254 ~ 18011834 (-)
CI01000304_18007357_18007779 NA coding downstream 27465 18007055 ~ 18008022 (-)
CI01000304_17837247_17882808 MYO18AA coding downstream 151527 17837247 ~ 17883960 (-)
CI01000304_18343532_18348936 NA coding upstream 307294 18343281 ~ 18349633 (-)
CI01000304_18356754_18371739 NA coding upstream 320707 18349995 ~ 18373932 (-)
CI01000304_18419836_18444486 USP25 coding upstream 383087 18419074 ~ 18444486 (-)
CI01000304_18456463_18461381 NRIP1B coding upstream 420374 18456361 ~ 18461381 (-)
CI01000304_18481215_18483117 NA coding upstream 445137 18481124 ~ 18484668 (-)
G429391 NA non-coding downstream 38216 17995452 ~ 17997271 (-)
G429382 NA non-coding downstream 56251 17978929 ~ 17979236 (-)
G429322 NA non-coding downstream 119370 17915911 ~ 17916117 (-)
G429321 NA non-coding downstream 119593 17915591 ~ 17915894 (-)
G429316 NA non-coding downstream 135592 17899666 ~ 17899895 (-)
G429396 NA non-coding upstream 196725 18232712 ~ 18234603 (-)
G429525 NA non-coding upstream 255517 18291504 ~ 18291749 (-)
G429697 NA non-coding upstream 295749 18331736 ~ 18332032 (-)
G429331 NA other downstream 110803 17923863 ~ 17924684 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other downstream 1168249 16854565 ~ 16860911 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other downstream 1254528 16769417 ~ 16780398 (-)
G427376 NA other downstream 2774082 15258964 ~ 15261405 (-)
G427423 NA other downstream 3673595 14361448 ~ 14361892 (-)
G429499 NA other upstream 201732 18237719 ~ 18238319 (-)
G429673 NA other upstream 550455 18586442 ~ 18591856 (-)

Expression



Co-expression Network