CI01000306_00107710_00118177


Basic Information

Item Value
gene id CI01000306_00107710_00118177
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 106737 ~ 118960 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_00107710_00118177.mRNA
ATATAAAAGAGAGAGGGAGGAATATCACTAAAGAAGTACAAGAAAGAGAAAGAAACAGGAGAAAGTTGAGTTCATAACTTTACACACGAGGGCCAGTAACTGCTGACACAGTCACACCATCATTAAACCCGGAGAGCCGTTCTGGTCCGGTCTGGATCCAGCGCTCTCACTTTTGTCAGCATCTCTATGAATTATTGAAACCGCCGACAGGCAGACAGTGAGAGAGAGACACTTCAACATCTGACTATTTCTGATTTAACCCTCGCTGAAACACAAACCCACAAGACACTCGACATAATGACACACTTCTGAGAGTTAAGATGCTTTAAAGTACTGGATCCAAACATCAGGACAAATACATCAGAACCGAACAGAACTAAACCGTCTTCAACTGCTCTGACGGAAGCCACAGGAGACATCAACACTAACGTGATCATACAGGTGGCCCCAAAAACCTTTTGGACACTTCAGTCACAGTTTAAATGTCTGAAATCATTAGATATAAAACATCAAGCAAGTGTCCGCTGTGCTCAGATGATGCTGGAGCTGTTCTCAGAACTAACTTCATTTTAACTGGCTGTTCTCAAGCACGAATCCGTCTGTAGAGCGATCAGATGACTGCCATCAGCGGCGTCGCTAACAACGATAATTATCATATATGCAGTTAAACTGTCCATCCATATATCAATCATTTCACTGGATGTAATATTGTCGGCATGGTTTAATGCATTAGCTTTAGCAGCTTTCATGTTTGAACAGAAAAGAGCTGCTAGCATTTGCCTTGACTGAAATCTTCCGTTCAGTGTTTGATGGGAAACTGGGTCACTTACAGTCACAATGATTCAGCACAACACAGAAGCACTCGAGCGTCAGGGCTCAATGTCGCTCGCAATCTCATCTTTAATAGAGTTTCTCGTGGCGGCTTCAGCGTCTCTGGCGCGGGAGGAGAAAGCAGACACTTTAGCAGCGCTTCATGTGTGATGAGAAACAGTCTTTCATCATCACCTGTTTAACATTTGAGACTCGACCCGAATCACACACCGAGGGTCCCGATGTCCCACTCAAACCCACACCAGAAGAGGAGAGAGCGAAACATATGATTCACATATCTCCTCATCGTCTCCGATCAGCTCCCGGAGACACCGGCTCATCCGCTCACGCTGTCGTCTCTCAGGGACGTTATCGGAGTCGAGTTCGTCTTATCGGCCTGCGGAAACGCATCACTGGCACAGGAAGTGATGGCACTCATCCTCGTGTCAGAGACGCAGATGTGCTCTTCCAACCACAAAATCTCTGCCGCGTCCAGCTCTCGCTGCCCGTCTCACCAAATTGTCAAATCATCTGCGCTAAGCAATGGCTTCCTGTCAGAGCCCAGAGAAAGAAGAAAGCAATTTATCGGTGTGGTCGGCGGAAGAAAAGCCAGAATCTTTCAGGATTCGGTCTTCAGCGGTTTTCTTTGCATATTAGGGCCGAATTCATGTGGAATTGTGCTGGGAATGATGCATTATGGGTGTTTAATGCTCTCACTGGAGTTTCAGTTGAGTCGAATCAAAACTGTCATGATGAATCAGAAAATGGAGATCTGAAGTGATGAAGATGAAGATCGTCACATCACAATCAGCTTAACACTAACAAGCTGTTACTGACCTCACACACACACACACACACACACACACACACTCACACACACTTACTTTCTCACTCACACTCACACTCTCACACACACACACACACACACACTCTCACACACACTTTCTCACACACACTCACACTCTCACACACACACTCACACACACTTACTTTCTCACTCACATTCACACTCTCACACACACACACACACACTTTCTCACACACACACACACACACACACTCTCACACACACTTTCTCACACACACTCACACTCTCTCACACACACACACACACACACTCTCACACACACTTTCTCACACACACTCTCTCACACACACACTCACACACACTCACACACACTTACTTTCTCACTCACACTCACACTCTCACACACACACACACACACACTCTCTCACACACACACACACACACACACACACTCTCACACACACTTTCTCACACACACTCACACTCTCTCTCACACACACACACACACACACACACTCTCCACACACACACACACTTACTTTCTCACACACACTCACACTCTCACTCACACACACTTACTTTCTCACACACACTCACACTCTCTCACACACACACACACACACACACACTCACTCACACACACACACACACTCACACTCTCACACACAAACACACACACTTACTTTCTCACACACACACATTCACACACACACACACACACACTGGAGGTTTAGTGCGTCCTGTGGACAGAAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_00107710_00118177.mRNA True 2374 mRNA 0.46 5 106737 118960

Neighbor

gene id symbol gene type direction distance location
CI01000306_00044391_00064128 NA coding upstream 42585 43677 ~ 64152 (+)
CI01000306_00135679_00139917 NA coding downstream 16540 135500 ~ 140454 (+)
CI01000306_00235686_00242814 NA coding downstream 116487 235447 ~ 242861 (+)
CI01000306_00245734_00262949 LOXL4 coding downstream 126181 245141 ~ 263251 (+)
CI01000306_00279658_00285330 ERO1B coding downstream 160698 279658 ~ 285494 (+)
CI01000306_00285981_00288513 NA coding downstream 166869 285829 ~ 288715 (+)
G430245 NA non-coding downstream 36103 155063 ~ 166375 (+)
G430268 NA non-coding downstream 93162 212122 ~ 212353 (+)
G430269 NA non-coding downstream 94372 213332 ~ 213645 (+)
G430270 NA non-coding downstream 95101 214061 ~ 214314 (+)
G430271 NA non-coding downstream 98629 217589 ~ 217842 (+)
G430409 NA other downstream 806584 925544 ~ 999902 (+)
G430452 NA other downstream 1031637 1150597 ~ 1150938 (+)
CI01000306_01209847_01210850 ACYP2 other downstream 1090773 1209395 ~ 1211232 (+)
G430719 NA other downstream 2029422 2148382 ~ 2150954 (+)

Expression


Co-expression Network