CI01000306_00285981_00288513


Basic Information

Item Value
gene id CI01000306_00285981_00288513
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 285829 ~ 288715 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_00285981_00288513.mRNA
CTATTAAAATGAACTCTTTTTTTATACATTCACATTATTTTATACTTTAAACTCTTGATTGATTAAAACAAGGTTCATAGACGTGTTATTAGTCAACAGTCTGTATATATATTTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAGCGTTTCCCATGCACTTTGACGAGAGCTCCATGTTTGCTGGCCATAAAATGGAGGCGAAAACACTGAAGGAGGAGTTCAGGCTTCACTTCAAGAACATCTCTCGCATCATGGACTGCGTCGGCTGCAGTAAATGCCGACTTTGGGGAAAGTTACAGACTCAGGGTCTGGGAACGGCCCTCAGGATCTTGTTCTCGGAGAAGGAAATCAAGAATCTTCCAGAAAACAGTCCGTCCAAAGGCTTCCAGCTCACGCGCCAGGAGATCGTGGCTCTGCTCAACGGATTCTCCAGTGTTTGTCCTCTTATTAGTAAGAATCACAGTCTTATTTCAACAGCAAATTTATTTTTTGTGGATGGTGACGAAACATCCTTATTACAAATCAACAAATGAGAATCACATTTTCCACATGACCAGTGAAATATATAGTGTTTATCATCATAAGACATCGGTGTCAATTTAAGTGCTTCAATCTCTACTGTTTTCAACAGATAAAGTAACATGAATTCATGCCTTACACACGTTATTCAGCCTGATCGTAATTAATCTATCGGCATCACAAAGTAAAGTGATGGTGTTGTGGTGTGATGTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_00285981_00288513.mRNA True 735 mRNA 0.40 4 285829 288715

Neighbor

gene id symbol gene type direction distance location
CI01000306_00279658_00285330 ERO1B coding upstream 335 279658 ~ 285494 (+)
CI01000306_00245734_00262949 LOXL4 coding upstream 22578 245141 ~ 263251 (+)
CI01000306_00235686_00242814 NA coding upstream 42968 235447 ~ 242861 (+)
CI01000306_00135679_00139917 NA coding upstream 145375 135500 ~ 140454 (+)
CI01000306_00107710_00118177 NA coding upstream 166869 106737 ~ 118960 (+)
CI01000306_00297906_00319127 NA coding downstream 9191 297906 ~ 319419 (+)
CI01000306_00327727_00330881 NA coding downstream 39012 327727 ~ 330932 (+)
CI01000306_00344942_00353683 NA coding downstream 55832 344547 ~ 354116 (+)
CI01000306_00367856_00370281 IRF2BP2B, I2B2A coding downstream 77707 366422 ~ 371450 (+)
CI01000306_00384380_00391350 NA coding downstream 95315 384030 ~ 392256 (+)
G430297 NA non-coding upstream 16963 268242 ~ 268866 (+)
G430283 NA non-coding upstream 54734 230819 ~ 231095 (+)
G430272 NA non-coding upstream 56277 217887 ~ 229552 (+)
G430271 NA non-coding upstream 67987 217589 ~ 217842 (+)
G430270 NA non-coding upstream 71515 214061 ~ 214314 (+)
G430303 NA non-coding downstream 129093 417808 ~ 418042 (+)
G430067 NA non-coding downstream 160329 449044 ~ 483614 (+)
G430309 NA non-coding downstream 218717 507432 ~ 507773 (+)
G430310 NA non-coding downstream 235348 524063 ~ 524288 (+)
G430409 NA other downstream 636829 925544 ~ 999902 (+)
G430452 NA other downstream 861882 1150597 ~ 1150938 (+)
CI01000306_01209847_01210850 ACYP2 other downstream 921018 1209395 ~ 1211232 (+)
G430719 NA other downstream 1859667 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 2684441 2973156 ~ 2979157 (+)

Expression


Co-expression Network