CI01000306_00327727_00330881


Basic Information

Item Value
gene id CI01000306_00327727_00330881
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 327727 ~ 330932 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_00327727_00330881.mRNA
ATGAAGAAGAAGCAGCAGCGTGTGAAGAGAGCCGCTGGAGATGCTGGCGATTACACGGTCGGTCAGGTGTCCGGCAGCCTGTTCCCAGAACAACACAAACCTGGAGCTTTATCCGCTTTATTCTCCTCCACTTCCTCAGCAAACACTTTAGTCTTCGTTCCTGCGCCGAAAACGGAGCCTAAACCCGCAGCAGCAGCGTCTGATTCCGCTGATGCCAAGAGTCCCGGTCAGATCCACAAACGGAACAAGACTCCGAAGACTCTTTCAGAGGCGGAGAAGAAGCTCCAGGACCGAGAGAGCGCGCTGCAGAACGCAGATGATGAAGGACGAACGAGTGCGAAGAAAGTCAAACGCAAGCGTCCGGATGAGCCGGAAGAAGAGGAGCGACCCGGCAAACGCAAAAAGAACAAAAAGAACAACGCGGAGGAGCGAATCAAAATGAAACGGACGGTGTTTGTGGGGAATCTGCCGGTTCGTGAAGACCCGACTATGTCCCGCAAAGTGGCGGCCATCCAGAGGAAAGTTCATCCTAAAAAGCAGAATATTAATGCGTACATTGTCTTCAAAGAGGAAGAGGCGGCGGCTGGAGCTCTGAAATGGAATGGTCAGGAGATCCAGGCGGGTTTCCATATCCGAGTGGACCGCGTCTCTCAGCACACCGGATTTCAGTTTGTTTTTGTGACAGATATATCGGAGCTTCCGGTACGAGAACACTTCCAGGAGTGCGGGAATGTGGAGGCCGTGCGTTTGGTGCGAGACAGAGAGTCTGGGATGGGGAAGGGCTTCGGATACGTCCTGTTTGAGAGCCCAGATTCAGTGATGCTGGCATTGAAACTCAACGGCTCCACATTACTGGAGCGAAAGATCAGGGTGAAACGCTCTGTGAAGAAGGAAAAAGAGAAGAAATCACATCCAGGTCGTCAGTCAGAAGGAAAAGAGCGATGGAGAAGAGGAGGAGGAGGAGGATTCAAAGGTCCAAAGCAGGAGTTCAGAAACAACTCCATGATGAATCCTGGCAGGAAACCAACACAAGCTTCATCGTTCAAGGGAGAGATGGCAGATCCTGCTGCCAAGAGAGGAAAAGGACTGAAAAAGAAGTTTAAGCACAAGAAAAAGAAACCTGCTGTTCACATTTAATGCCTGAGCTTTTATTTTTTTTTTTACACGTTTAGTGTTCTTATGTCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_00327727_00330881.mRNA True 1188 mRNA 0.50 9 327727 330932

Neighbor

gene id symbol gene type direction distance location
CI01000306_00297906_00319127 NA coding upstream 8308 297906 ~ 319419 (+)
CI01000306_00285981_00288513 NA coding upstream 39012 285829 ~ 288715 (+)
CI01000306_00279658_00285330 ERO1B coding upstream 42233 279658 ~ 285494 (+)
CI01000306_00245734_00262949 LOXL4 coding upstream 64476 245141 ~ 263251 (+)
CI01000306_00235686_00242814 NA coding upstream 84866 235447 ~ 242861 (+)
CI01000306_00344942_00353683 NA coding downstream 13615 344547 ~ 354116 (+)
CI01000306_00367856_00370281 IRF2BP2B, I2B2A coding downstream 35490 366422 ~ 371450 (+)
CI01000306_00384380_00391350 NA coding downstream 53098 384030 ~ 392256 (+)
CI01000306_00399584_00413590 NA coding downstream 68601 399533 ~ 414128 (+)
CI01000306_00424179_00424623 NA coding downstream 92844 423776 ~ 424798 (+)
G430297 NA non-coding upstream 58861 268242 ~ 268866 (+)
G430283 NA non-coding upstream 96632 230819 ~ 231095 (+)
G430272 NA non-coding upstream 98175 217887 ~ 229552 (+)
G430271 NA non-coding upstream 109885 217589 ~ 217842 (+)
G430270 NA non-coding upstream 113413 214061 ~ 214314 (+)
G430303 NA non-coding downstream 86876 417808 ~ 418042 (+)
G430067 NA non-coding downstream 118112 449044 ~ 483614 (+)
G430309 NA non-coding downstream 176500 507432 ~ 507773 (+)
G430310 NA non-coding downstream 193131 524063 ~ 524288 (+)
G430409 NA other downstream 594612 925544 ~ 999902 (+)
G430452 NA other downstream 819665 1150597 ~ 1150938 (+)
CI01000306_01209847_01210850 ACYP2 other downstream 878801 1209395 ~ 1211232 (+)
G430719 NA other downstream 1817450 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 2642224 2973156 ~ 2979157 (+)

Expression


Co-expression Network