CI01000306_00344942_00353683


Basic Information

Item Value
gene id CI01000306_00344942_00353683
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 344547 ~ 354116 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_00344942_00353683.mRNA
GCATAAAACGAGATGTTGAACATCCATAAATTCAGTGTCAGAGATAAATAAATAATGCACAGAATTACACAATATCATAAAGCTACATTTGGCATTGCAGTGTTAGAAAAGCTGTAGATATTGATAGTAATATGCAACTTAGATGAACAAATAGATCCAATCACAATGCAGTATGCAAATATTACAATGATGCCATTGCTTCAGGTTCGAATGTTCTATCAATAATCTATCAAATCTTAAATTTCCTTAATCTTAAAGTTAAAAATATATCACAACTAAGACTGAAATTGCTGTCTTTCAAGCTCCGTAGAAGATAAGATAAATATGATTTACAGTACTGGGCACTATAATGGAAACTAGAGTTTTTTTCAATACTTTGAATCAGTATTATCAGAATGCATCATGCAGCAAACACGCGTCACACGCAGCAGAGCCCACCTGAGGCTCCAGCATCAGATCAAACACACAAAACCAAAATCACTGCCACATGTGTGCGTTCCGTCGCCATGGCAACGAAGCATTCCACAGCGGGCACAGGGTTGCCAGGTCACTCTGTCACCGCCGGTGAAACTCTTCTGAAACTAATGCTGTTCGCAAAACTGCATTTTTCGCCTGGAAACACAAAAGCAGCAGCTCATGAAGTTCCTCATCATTGTGTTTCTCTCGTCAGTGTGAACCAGATCAGCTGGAGCGACGCCAAACATGCTGAAAGGAGTGGAGATGCCTTTCACAGTCACATGAGGCGCTTTGGCTTTAACTCCCGTCCTCTGAAATCACACCCATCTCACTGCAAGATCAGAATCACACGGCAAGAAATCGTTCACAAGCCTGAAAAACCGCATGTTGAAAATAAACGCTTCAGTTTGCAGCAGAAGATCTGTGAGGAACATGTGGGAACGCATGAAGAACAGCCTGGATCCAGGGCTGGAGATGATCCGCACGGATCCGGTTTGCTGAGGTCGGAGTGGCTGATGGCAAACGCCCTTGGCGTCGAGCGTCAGACTGCTGTGATTGAGCCGGATGTTCCAGCTGTCGTGATTACAGAGGAATATCAGCAGATGAAGGACGGACGTGTGTATGTGTTCCGCTTGTGTCCCTGAATATTGTGTCTGCTGTAAAATAACACCTTCACACACACACAACCTTGCACTGTCTTTTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCACTCCCACCAGATCCTGTTGCTCAGATCCGTAGGTGACGTTGTGTCCGTGCGGAGAGTATCGGTTTCGCTCTGAACCCCAGTGAAGCAGGGATGAGGGTGGAGCGACGGCGCAGCGCTGAAAGAGTACAGAACACAATGATCCTGTAACAGAATGAATCAGTATCACAATAGTGGAGGCTCATGGGAAACAACATTTCCAGATAAGACAGAATGAGAAGCTTTCTGTGAGAGATTACAGGTGAAGTTTATACCGGCCAAATTCACACACTAAACAAATTGTTTGGCATCTATTTCTGACCACAGATGCACTACAGGCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_00344942_00353683.mRNA False 1533 mRNA 0.46 5 344547 354116

Neighbor

gene id symbol gene type direction distance location
CI01000306_00327727_00330881 NA coding upstream 13615 327727 ~ 330932 (+)
CI01000306_00297906_00319127 NA coding upstream 25128 297906 ~ 319419 (+)
CI01000306_00285981_00288513 NA coding upstream 55832 285829 ~ 288715 (+)
CI01000306_00279658_00285330 ERO1B coding upstream 59053 279658 ~ 285494 (+)
CI01000306_00245734_00262949 LOXL4 coding upstream 81296 245141 ~ 263251 (+)
CI01000306_00367856_00370281 IRF2BP2B, I2B2A coding downstream 12306 366422 ~ 371450 (+)
CI01000306_00384380_00391350 NA coding downstream 29914 384030 ~ 392256 (+)
CI01000306_00399584_00413590 NA coding downstream 45417 399533 ~ 414128 (+)
CI01000306_00424179_00424623 NA coding downstream 69660 423776 ~ 424798 (+)
CI01000306_00442430_00460709 NA coding downstream 88314 442430 ~ 461183 (+)
G430207 NA non-coding upstream 7437 267775 ~ 337110 (+)
G430297 NA non-coding upstream 75681 268242 ~ 268866 (+)
G430283 NA non-coding upstream 113452 230819 ~ 231095 (+)
G430272 NA non-coding upstream 114995 217887 ~ 229552 (+)
G430271 NA non-coding upstream 126705 217589 ~ 217842 (+)
G430303 NA non-coding downstream 63692 417808 ~ 418042 (+)
G430067 NA non-coding downstream 94928 449044 ~ 483614 (+)
G430309 NA non-coding downstream 153316 507432 ~ 507773 (+)
G430310 NA non-coding downstream 169947 524063 ~ 524288 (+)
G430311 NA non-coding downstream 171011 525127 ~ 525334 (+)
CI01000306_00235686_00242814 NA other upstream 107178 235447 ~ 242861 (+)
G430409 NA other downstream 571428 925544 ~ 999902 (+)
G430452 NA other downstream 796481 1150597 ~ 1150938 (+)
CI01000306_01209847_01210850 ACYP2 other downstream 855617 1209395 ~ 1211232 (+)
G430719 NA other downstream 1794266 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 2619040 2973156 ~ 2979157 (+)

Expression


Co-expression Network