CI01000306_00399584_00413590


Basic Information

Item Value
gene id CI01000306_00399584_00413590
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 399533 ~ 414128 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_00399584_00413590.mRNA
ATATAAAAAAAGATACAAAAAAAGAAAATCACATGAGTTTTACCATTCAAAATGAATGTCTGCTTTGTCACCGCAGCATCTCAGGCTGAGAGAAGGATACGGCGGTCCGTCGCCGTGGCAACCATCTCACGGATGCGGCTAGAGACGAAAAATGTTGTTTTCATCATAGTTGTCGCTGTAGTAAACCGAGCTGTCGCTTCTGTGATTTTGAGAGATTTCTGCTGTGTTTTTGTATATTTGGACCTCATGATCTGCATGTGCCCTAAAATAGATTCATTGAGTTCTTGTACTGTACAGCGTGTTTGTTCAGAGGTCACTCTCAGTCGGTGTGTTTATAAAGCCAGCTGTTGTTTTTGTTGTGTTGAGCAAAATACAGTTAAGTGGGTAAGATATTCCGAGATTTCCGGAAAAAGAGTTTGCAGTAGCGCCTCCACCCCAGTAATTACAGCTCGCTGGCTTGGCAGGAGCCCGTTGGAGGAGATTCTGCTTAGTAACCCGTTGTCATGGTGGTGGTCCCGCGCTCTGATTGGACGGGAGACGAGGCCTCAGGGACTCCGACGACGCTCTTGGCCGGGATCCCTGGACCCTCGTCCTCCAAATGACGACTTCCAGCACAAAACCTCCCAGAATGCTTTGCTGCAGGACAAAGGGAGTTGGACAGCGCTTCCGTTCACAAGGCTCTGGAAACGAATCTGTTCGGGGAGTGTGGAGAGGAGAAGCGCTGATGTTGGGCTGGACACAGGGCCTGTCTTTGTGCTGGAGAGTGAATGATGAATGCTCTCTAGACGGCTCGACTTCACTGTTCAGCTGCATCTTTCCTCGCGTGTTTGGTGTGGTAAAGTTATAAATACTGCTTTAAACATCCTGAACCTCACAAGAGCCGCAATTCAGACCTCTCATACTGTTATTCTGAGCATGTTAGGTCACATGACTTCATCTCTGTTATTTGATTGGTGCATCCTCCACACTGGACGGCCTGTACTGTTTGTTGATGTTAAAAAGACACCAAATTAAATTTGTTTGACCTAAGTTTGCTCAACAAAGCTGTCAAAATTAATCCAATATATGATTTTTAACTTTAACTAATGTAGGGCTATGCATTAAAAATATAGCCTATATGCATAATACATGCATTAAAAATGTTAAATAATGAGTGAATTCAAAGAAATGTGTTTTTATGTCTGTGTAACGACTTGAAATGACGTTCCCTTCGGCTGACGTCACTGAGCTCTTATTTTTAACCCCTAAATGTTTAAAGAGTTTAAAAGTTGACAAAACGAACTCTATATGTGCATTTAACATTAAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_00399584_00413590.mRNA True 1309 mRNA 0.43 6 399533 414128

Neighbor

gene id symbol gene type direction distance location
CI01000306_00384380_00391350 NA coding upstream 7277 384030 ~ 392256 (+)
CI01000306_00367856_00370281 IRF2BP2B, I2B2A coding upstream 28083 366422 ~ 371450 (+)
CI01000306_00344942_00353683 NA coding upstream 45417 344547 ~ 354116 (+)
CI01000306_00327727_00330881 NA coding upstream 68601 327727 ~ 330932 (+)
CI01000306_00297906_00319127 NA coding upstream 80114 297906 ~ 319419 (+)
CI01000306_00424179_00424623 NA coding downstream 9648 423776 ~ 424798 (+)
CI01000306_00442430_00460709 NA coding downstream 28302 442430 ~ 461183 (+)
CI01000306_00496203_00497820 CUNH21ORF2 coding downstream 82075 496203 ~ 498460 (+)
CI01000306_00534481_00545134 NA coding downstream 120353 534481 ~ 545321 (+)
CI01000306_00546664_00553895 MGEA5L coding downstream 131537 545665 ~ 554101 (+)
G430207 NA non-coding upstream 62423 267775 ~ 337110 (+)
G430297 NA non-coding upstream 130667 268242 ~ 268866 (+)
G430283 NA non-coding upstream 168438 230819 ~ 231095 (+)
G430272 NA non-coding upstream 169981 217887 ~ 229552 (+)
G430303 NA non-coding downstream 3680 417808 ~ 418042 (+)
G430067 NA non-coding downstream 34916 449044 ~ 483614 (+)
G430309 NA non-coding downstream 93304 507432 ~ 507773 (+)
G430310 NA non-coding downstream 109935 524063 ~ 524288 (+)
G430311 NA non-coding downstream 110999 525127 ~ 525334 (+)
CI01000306_00235686_00242814 NA other upstream 162164 235447 ~ 242861 (+)
G430409 NA other downstream 511416 925544 ~ 999902 (+)
G430452 NA other downstream 736469 1150597 ~ 1150938 (+)
CI01000306_01209847_01210850 ACYP2 other downstream 795605 1209395 ~ 1211232 (+)
G430719 NA other downstream 1734254 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 2559028 2973156 ~ 2979157 (+)

Expression


Co-expression Network