CI01000306_00563449_00566897


Basic Information

Item Value
gene id CI01000306_00563449_00566897
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 562930 ~ 566897 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_00563449_00566897.mRNA
ATGGATCTGATGGTGTCACAGGTGCGCAGGAGCGTGGTGTCAGTGATCCAGCAGTATTCACACATCAGCGGGCTTTACCTGTGTGGTCATTCTGCCGGAGCGCACCTGGCTGCTATGGTTCTGTCCACCGATTGGTCCCAGTACGACATATCACCGCAAATCAAAGGTGCTTTTCTCGTCAGCGGCATTTATGACCTGCAGCCCATCCTGTCCACATACGTGAACGAGCCGCTGAAGATGAACGAGGAAGTGGCGTTAAGGAACAGCCCAAGTCACTTCCTGTCGCAGCTCAAAGTCTCATCTTCTTCCTGTGACATCATCGTCGCTGTGGCGCAGAACGACTCGCCCGAGTTCCGAAAGCAGTCGGAGGAATACTTCAAAGCTTTGGAATCTGCCGGTCTTAAAGTCTCTTTTGAAGATGTTCCCAACACTGATCATTTCAGCATCATAGAGCAACTCGTTGATGAGAATTACCACCTCACAAAGGCCGGTCCAGCAGATAATGGACATATTGTCCGTAAAAACAACACAGTCTCTGTTTTGGAGGAGCGTGTGTCTCTGAGACAAGGCAAACTCATTTTTTTTTACTCATTGTACACTTATAATATTCTTAACACTATTTCAGGTCTATTTTATGACATTAGATAAAAATCTAAATGCGTTGAATCTAAAATTACGTGTCTTGTTTTGGTGAAGGGTTAGCTCATGAATATTATGATGTTGCTTGGCAATTTTCCGGACTTTCGGGTTGCGTAACCTAATTAATATGTAAGAGCGAAGTCTTCAGTGATTGGCCAGCTAACTTGGCACTCATTTGCAGACGTCTGCTTTCAACCAATCAGCTAAGCATACTGGGCGAGCGTGGCGTTACGTAATTAATATTCAAGAGCAAAGTCTTCTGCGTCGCGTGCGATGGGCGGGGCTTCGCGTTACCGGTGTGTTGGCAGCCGGCGGTTCGTTTCGTTCTGAACGGCGGAGGAAACGGTGTCGGAAACACAGAATGGAGCGGGGATGAACTAACTCGTTATCACACAAGACTAAACTGAGAGAAAAACATCAGAGGAATACAGTAAGTATATGATGTAATTTGAAAGTAAATATTCAGGAAATTCAGAGCGTTTTTTCCTCAGTCTCACAAAGGGTTAAATTCGGTTATTCAGCAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_00563449_00566897.mRNA True 1167 mRNA 0.45 6 562930 566897

Neighbor

gene id symbol gene type direction distance location
CI01000306_00554763_00557805 CANT1B, CANT1 coding downstream 4737 554439 ~ 558193 (-)
CI01000306_00509647_00514228 LDB1B, LDB1, XLDB1, LDB1.L coding downstream 48702 509294 ~ 514228 (-)
CI01000306_00498705_00504548 ORC2 coding downstream 58382 498484 ~ 504548 (-)
CI01000306_00482506_00494090 PFKLB, PFKL coding downstream 68840 482482 ~ 494090 (-)
CI01000306_00474870_00478789 BRAFLDRAFT_123431, GM5580, IF4A3, GM8994, EIF4A3.L, EIF4A3 coding downstream 84015 474764 ~ 478915 (-)
CI01000306_00566977_00570868 NA coding upstream 80 566977 ~ 571035 (-)
CI01000306_00575882_00583996 SYNGR2B coding upstream 8796 575693 ~ 584438 (-)
CI01000306_00588975_00600403 NA coding upstream 22065 588962 ~ 601346 (-)
CI01000306_00602711_00614050 NA coding upstream 35794 602691 ~ 614402 (-)
CI01000306_00646585_00650863 GNB4, GNB1, GNB2, OL-GB1, GNB1A, GNB1B coding upstream 79675 646572 ~ 650863 (-)
G431568 NA non-coding downstream 41379 520960 ~ 521551 (-)
G431556 NA non-coding downstream 144888 417797 ~ 418042 (-)
G431551 NA non-coding downstream 152215 410428 ~ 410715 (-)
G431550 NA non-coding downstream 153208 409457 ~ 409722 (-)
G431546 NA non-coding downstream 159371 403217 ~ 403559 (-)
G431475 NA non-coding upstream 93147 660044 ~ 661145 (-)
G431576 NA non-coding upstream 133022 699919 ~ 700243 (-)
G431486 NA non-coding upstream 146010 712907 ~ 714529 (-)
G431618 NA non-coding upstream 217070 783967 ~ 785240 (-)
G431611 NA non-coding upstream 290231 857128 ~ 868493 (-)
G431706 NA other upstream 596130 1163027 ~ 1163338 (-)
G431814 NA other upstream 744805 1311702 ~ 1312434 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other upstream 1151036 1717933 ~ 1726043 (-)
G432022 NA other upstream 2433339 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 3975826 4542723 ~ 4545244 (-)

Expression


Co-expression Network