CI01000306_00664788_00672147


Basic Information

Item Value
gene id CI01000306_00664788_00672147
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 664721 ~ 673052 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_00664788_00672147.mRNA
GTACAAAATGAGAGACACCATCTGCTAGTTTGACTCACACAGAAGAATGAACTGATACTGGAGCGTCATGGAGATCGTAAACTCCAGAGTGGATTGTGAAGTTTTACCAGGAGATCACAGGTCAGTAGATCATGATGAAGAGGAGAGAGATGAAGGTGTTGAGCTGATGGAGGTTCTGCTGAGAGGAGGATCTCCGTGGGGCTTCACTGTCAGAGGAGGACTGGAGTATCACGAGCCGCTCATCATCACCAAGGTGGAGGACGGAAGTCGAGCGGCGCTGGGTCGACTCCAGATCGGTGATGAGATAGTCAGCGTTAACTCGGTTCTTCTCAGCGGTTACAGACTGGAGGCCATTTGTCTGGTTAAAAGCTCACATAAGACGCTCTCTCTGGGAATAAAACGGCGTTACGGCAGAAATCACCATGACGTTTGTGAGTCGGCGACACCATTATTTGACAGCGTGGAACAAAAGAGGCGTCATTGTGTGCTGCTGCACGCCGTCACACACAAGAGGCTCGAGGGCCGGCCATTGTCTGTCGTCACGCCTCATATGCGGGTCTGGGGCCTCTGGGTCTGTGTTTCTCCTGGACGCTAGTGGGCTGCCGTCATCAGAGGCCTTCTGGGAGTTTATATGTATTATGAGGTCATGAGACTGTAGAAACATCCTCACTCACAGTCATGTCTTGAATTCATTTAAGATTTTAAGAAGAGTTTTGTGCAGTTCATCCTCCCCAACAACTGAGATCCAGTCAATAATAGATACACAATGTATGTTTTTGTAATGTTATGGAGCAACTTTATTTACTCAGTTTTATTCATGCGTACTGACTGTACACAAACACATCAGTAACCGGTCAGCGTTACATTCCCTTTGTCGCCCCATCAGAGCATTTCAGGCCCTACAGCGCCATCCAGTGGTGCTTAAAATGTCTGAAAAGCATTGCATCAGATCATAGCTGCGTCCTAAATCACATACTCTCTTTAGTATGTACTTATTTTGACGGCCATTAAAAAAGTATGTTCTATATAGTATGTGTGTGTAGTATGAATATAATCTGGACGTACTACATTCGCCATGTTGTCATCATCATGTGACCTACCAGTGTCATTCACTGACAAATCCTCACTGGTGGCCTCATGGGATAGTATAGTTTCCATCATATGCACACTTCAGAATCTCTCAGACTTTTTATCTACTCTTTTATGAGTGCTGTGAATTCAGACACACTTGATTTGTCACATACTGTATAGTAGGGAAGTTTGTGATTTCAGATGCAGCCCTTGTTTCTTTTATCAGTGCACAAATAGTTTAATTATGGACATGTTCTACTTAGTGCTATTATAATTATTATTATTTTTAATATTTCGTTTTTTATTTTTATATTTTCCGTATTAATTTTAGTTAGTTTTAGTAATTTTGTTGTTTTTGTCATTTCTATTATTTTTAATGTCTATATAGTTTTTATTAATTTTTATCAATTTTCAGTTACTAGCGTTAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_00664788_00672147.mRNA True 1500 mRNA 0.41 3 664721 673052

Neighbor

gene id symbol gene type direction distance location
CI01000306_00630572_00641931 TMC6 coding upstream 22595 630572 ~ 642126 (+)
CI01000306_00571360_00574170 KITH, TK1 coding upstream 90186 571263 ~ 574535 (+)
CI01000306_00546664_00553895 MGEA5L coding upstream 110620 545665 ~ 554101 (+)
CI01000306_00534481_00545134 NA coding upstream 119400 534481 ~ 545321 (+)
CI01000306_00496203_00497820 CUNH21ORF2 coding upstream 166261 496203 ~ 498460 (+)
CI01000306_00681384_00689565 NA coding downstream 8332 681384 ~ 689812 (+)
CI01000306_00693218_00693943 NA coding downstream 20166 693218 ~ 694559 (+)
CI01000306_00705287_00711760 CLCN4 coding downstream 32235 705287 ~ 714524 (+)
CI01000306_00730637_00781399 CLASP1 coding downstream 57585 730637 ~ 781399 (+)
CI01000306_00887579_00889885 NA coding downstream 214138 887190 ~ 890708 (+)
G430075 NA non-coding upstream 17677 564976 ~ 647044 (+)
G430170 NA non-coding upstream 52130 608747 ~ 612591 (+)
G430206 NA non-coding upstream 56430 605291 ~ 608291 (+)
G430095 NA non-coding upstream 80600 580251 ~ 584121 (+)
G430189 NA non-coding upstream 102209 558552 ~ 562512 (+)
G430331 NA non-coding downstream 28931 701983 ~ 702194 (+)
G430335 NA non-coding downstream 56851 729903 ~ 730241 (+)
G430344 NA non-coding downstream 133465 806517 ~ 806752 (+)
G430389 NA non-coding downstream 234271 907323 ~ 913761 (+)
CI01000306_00235686_00242814 NA other upstream 427352 235447 ~ 242861 (+)
G430409 NA other downstream 252492 925544 ~ 999902 (+)
G430452 NA other downstream 477545 1150597 ~ 1150938 (+)
CI01000306_01209847_01210850 ACYP2 other downstream 536681 1209395 ~ 1211232 (+)
G430719 NA other downstream 1475330 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 2300104 2973156 ~ 2979157 (+)

Expression


Co-expression Network