CI01000306_00693218_00693943


Basic Information

Item Value
gene id CI01000306_00693218_00693943
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 693218 ~ 694559 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_00693218_00693943.mRNA
ATGCCTTACCTCATCCACACGGCTCACGCCCAGTTCGTGGCTCTCTGGCTCGGGACGGTCGGCTGGATCCTCATCATAGTGACCGTCGGGCTGGTGGAGTGGCGGGTTTGGGAAGTGTCTGACCTGTCTGTCATCACCTCCGGTCTGGCCTGGGTGGGTATTTGGAGAGTGTGTTTTTATAGTCACGTTCTGATCTTATCCAACAATCAGATCATGTTCTGTCAGAGGATTCATTTGTCGGAGTCGTTCACGCCACTGGAAATCGCCACGGCACAGGTGCTCATGCTAGTGGCGCTGATTCTGGGGCTCATGGGAAACGCCAGTGTTGTTTACGGCCTCAGGAACGTTTACTTCGGACTGAACACGTTTAAAGCCATCAGACGATCGTTTTACACCGGCGGGGTTTTGTTCATCCTCACCGCAGCTGCTGCGCTCGTTCCCGTGTGCTGGAATCTCCATTCGGTCGTAAACAATCAGACTATAATATTCCCAGCAGCGTTTCTCATGCCTCCCGCTCCTGTAAACCAGTCTGTTGGACCTGGTATCATCGTGGGGATTTTTGCATCCGTCCTGTTGGTCTGTAGCGGGGTGGTTTTTCTGTCCTACAGGGTCCCGGTCATACTGGAGCCCAAAGTGAGGCCCTCATGGCCCGGAGAAGGATGCTCGGGAACCCGTGTTAACCCCCAGGGAATTGACAATCCAGCTTTCCAAACACATCCATCCTGAAATTCAGTTTTTAGGATGGATGTGAGTGTGTGATGACTATCAGTAGCTAATTATGATGCTGTGTTCATACTGTAACTTTTACTGTACAAACACTGCCAGACCCAGGAGACCCTCATAATCAAATAATACTAATAATGTGCAAACTATATTTTCCAGAAAATAAGTCAGATATGTAGCAAATTTACATTCTTAAAAGGAAAAACACACAGATAAAGACGCATTTTATTATTATCTACGTTCAGAAATAATGTAAAATACTGGTAGGCCTAAATAAAATGAAACGTTTACAGACATTAAACACTAAAAACTTATTTTATTTCCCCTCATTCCACAACAAATTCTCAGGAACAGATCAGGAATGAAAAATATAAGTAGGCCTATAATGGCATTCATTATAAACGCCACGAATACAAAGTCACTTTGGAATATAAGTCGCAGCACGTTTCAAATAATAAAAAACGGGACTTATATTCTGGAAAATGTTATCTATTTTCATCTGTTTACATACTTTCTGCATTGAATTTTACTTTTTTTTTGCCATTGTTTTTGTGCTTTTATCTCATTTTGTATAATGTATTTGAATTGTTTAAAGGGTCTGTCATTGAGATGTGTATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_00693218_00693943.mRNA True 1342 mRNA 0.43 1 693218 694559

Neighbor

gene id symbol gene type direction distance location
CI01000306_00681384_00689565 NA coding upstream 3406 681384 ~ 689812 (+)
CI01000306_00664788_00672147 NA coding upstream 20166 664721 ~ 673052 (+)
CI01000306_00630572_00641931 TMC6 coding upstream 51092 630572 ~ 642126 (+)
CI01000306_00571360_00574170 KITH, TK1 coding upstream 118683 571263 ~ 574535 (+)
CI01000306_00546664_00553895 MGEA5L coding upstream 139117 545665 ~ 554101 (+)
CI01000306_00705287_00711760 CLCN4 coding downstream 10728 705287 ~ 714524 (+)
CI01000306_00730637_00781399 CLASP1 coding downstream 36078 730637 ~ 781399 (+)
CI01000306_00887579_00889885 NA coding downstream 192631 887190 ~ 890708 (+)
CI01000306_01008614_01011977 RALB.S, RALBA, RALBB, RALB.L, RALB coding downstream 314055 1008614 ~ 1011977 (+)
CI01000306_01047698_01080329 TMEM63A, TMEM63B coding downstream 353139 1047698 ~ 1082259 (+)
G430075 NA non-coding upstream 46174 564976 ~ 647044 (+)
G430170 NA non-coding upstream 80627 608747 ~ 612591 (+)
G430206 NA non-coding upstream 84927 605291 ~ 608291 (+)
G430095 NA non-coding upstream 109097 580251 ~ 584121 (+)
G430189 NA non-coding upstream 130706 558552 ~ 562512 (+)
G430331 NA non-coding downstream 7424 701983 ~ 702194 (+)
G430335 NA non-coding downstream 35344 729903 ~ 730241 (+)
G430344 NA non-coding downstream 111958 806517 ~ 806752 (+)
G430389 NA non-coding downstream 212764 907323 ~ 913761 (+)
CI01000306_00235686_00242814 NA other upstream 455849 235447 ~ 242861 (+)
G430409 NA other downstream 230985 925544 ~ 999902 (+)
G430452 NA other downstream 456038 1150597 ~ 1150938 (+)
CI01000306_01209847_01210850 ACYP2 other downstream 515174 1209395 ~ 1211232 (+)
G430719 NA other downstream 1453823 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 2278597 2973156 ~ 2979157 (+)

Expression


Co-expression Network