CI01000306_01120958_01127237 (SULT6B1)


Basic Information

Item Value
gene id CI01000306_01120958_01127237
gene name SULT6B1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1120816 ~ 1127560 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01120958_01127237.mRNA
ACACTCCAGAGTCTGTTCAGCAGCTGAGCTACATGAACTGATTACAGATTAAGTTGTACCTTTCACCTCTGCCAAAACCTGCTTTTCAGGAACACTAGCTAGTGTGTCTCAGCCTCACACACTCAATCAAAGGGAACAATCAGTCAGACTGACTCGGGGCCCCTCGGTCGGCGGAAATGGATCTTTCTCACGCGAGCCCGTGAATGTGGGCGGATCTACAACATTCTCCTTCCTGCACTACAGCATAAATACTCTCTCTCTCTGTGTGTATGCGTGTCTTTCTGCAAATCTGAAGCTCACAGCGAGCACCAGGACAAAAAAACATGAGTCAAACACCACCTATGAGTAAAATGAAGTCCAGGATGGAGGAAGCGGCGAAGATGAAGGATGAAGACAAGCTTTATAAGCGAGAGGGAATCCTGTACTCCACCATTCTCAGCCCACCGGAGACCCTGGACAAGTTAAAAGACCTGGAGGCCAGAGAGGACGACCTCATCTTGGTGGCGTACCCTAAATGTGGGTTTAACTGGATGGTTGCAGTCTTGCGTAAAGTCATGAATGCTTCCACTGGGAAAAATGAGAAACCACCTGAGAGGCCTCCTCTGGTTGAGTTTTTACCTCCAGATGTTCAAGAGGAAATAGCTGCAATGCCCCCGCGGAGGCTTCTGGGAACTCATCTACACCCTGACAAAATGCCTGCCTCTTTCTTTACTAAGAAACCAAAGATTCTGGTGGTGTTCAGAAATCCAAAAGACACCCTTGTCTCATTCTTCCATTTCATGAACAAAAACCCGGTTCTGCCCAGCGCCGAGTCGTGGGACAAGTTCTTCTCTGACTTCATGGCTGGTGAAGTTGCCTGGGGCTCTTATTTTGATCACGCTCTCGCCTGGGAGAAACGTCACGATGATCCAAACGTGATGATCGTGACATACGAGGAACTGAAACAGAACTTAGCAGAAGGTGTGAAGAAAGTCTCGGAGTTCTTCAACCTTCCACTGACAGATGAGCAGGTCAGCAGCATCGCTGGAGAAAGTACGTTCAGCGCTATGGTGGAAAACTCCCAGAAATCTCACGGCAATTTTGGCAGCATCTTCTTCAGGAAAGGTGAGGTGGGCGACTGGAAGAATCATTTTTCCGATGTCCAGAGTAAACAGATGGATGAGCTCTTCCAAGCCAAACTAGCTGGAACAAAAATTGGAGCCAGACTGAAGTATGACCTTTACTGCCAGTAAATGTGAAGACACGACGAGGACCGACGGATGAAGACAGTTTATTTCACAGGGATTCAGAAGAGCAGCTGTTTAATGGTTTTCATGTTTTGATACATTCCATTGTTTACAATAAGCAAAAAAGCATCGCTCTGTCATTAATAAA

Function

symbol description
sult6b1 Enables sulfotransferase activity. Acts upstream of or within cellular response to xenobiotic stimulus. Predicted to be active in cytoplasm. Is expressed in several structures, including EVL; digestive system; ectoderm; forerunner cell group; and tail bud. Orthologous to human SULT6B1 (sulfotransferase family 6B member 1).

GO:

id name namespace
GO:0016232 HNK-1 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01120958_01127237.mRNA True 1374 mRNA 0.47 7 1120816 1127560

Neighbor

gene id symbol gene type direction distance location
CI01000306_01109880_01112379 VIPB coding downstream 8013 1109779 ~ 1112803 (-)
CI01000306_01086915_01093095 SLC29A1B coding downstream 27715 1086768 ~ 1093101 (-)
CI01000306_01024523_01027114 NA coding downstream 93685 1024340 ~ 1027131 (-)
CI01000306_01018942_01021787 NA coding downstream 98987 1018806 ~ 1021829 (-)
CI01000306_00993910_01003851 NA coding downstream 116249 991850 ~ 1004567 (-)
CI01000306_01201604_01202608 FOXG1B coding upstream 73122 1200682 ~ 1204073 (-)
CI01000306_01284891_01287606 NA coding upstream 157263 1284677 ~ 1287630 (-)
CI01000306_01439864_01463150 NA coding upstream 312226 1439786 ~ 1463150 (-)
CI01000306_01469486_01475137 NA coding upstream 341228 1468788 ~ 1475137 (-)
CI01000306_01476783_01478195 NA coding upstream 349104 1476664 ~ 1478195 (-)
G431655 NA non-coding downstream 36447 1082547 ~ 1084369 (-)
G431662 NA non-coding downstream 59403 968276 ~ 1061413 (-)
G431682 NA non-coding downstream 63111 1054462 ~ 1057705 (-)
G431683 NA non-coding downstream 63457 1051101 ~ 1057359 (-)
G431639 NA non-coding downstream 174762 907354 ~ 946054 (-)
G431699 NA non-coding upstream 24237 1151797 ~ 1152039 (-)
G431700 NA non-coding upstream 24749 1152309 ~ 1152522 (-)
G431705 NA non-coding upstream 33257 1160817 ~ 1161597 (-)
G431792 NA non-coding upstream 54172 1181732 ~ 1182178 (-)
G431810 NA non-coding upstream 94301 1221861 ~ 1222360 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 637167 482482 ~ 494090 (-)
G431706 NA other upstream 35467 1163027 ~ 1163338 (-)
G431814 NA other upstream 184142 1311702 ~ 1312434 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other upstream 590373 1717933 ~ 1726043 (-)
G432022 NA other upstream 1872676 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 3415163 4542723 ~ 4545244 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003714 sult6b1 coding NC_007122.7 CM002895.2 43375326 ~ 43388063 (+)