CI01000306_01278230_01279369


Basic Information

Item Value
gene id CI01000306_01278230_01279369
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1278230 ~ 1279484 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01278230_01279369.mRNA
GTGTCTCACAGAAACCCTTCCAGATTCAAACCAGGGTCGACTAGAGGAGTTTGTGGCCAACCCATCCTCTGAGTGTGACAGGAGGAGGGGCGTTTGTGTGTTGGAGTTTGGGGGGAGACGCTCTTCTGAATGGATAGAGTGGGAAGACGAACAATCAGAGAGACAGCAGCATGCACGTCTCCTCTTGGACATTAGACTGGGACGGAAACCTTTCGGATATCTTGGATTTAAACTAGCACTGAAAGAAGGAGCAAAAAAGAGCTTTTCGTACTCTGTTGTTCCTTCCCATTCCGTGGTTTCCTGGGAGGAATCTGGAAATAGTTTCCCTCTCGGTCAGGGATCATGGATTTGGAGTGGGCGTCCGGGGGCCCCGAGGGCTTCTACCAGGAGCCGAGCTTCCCCGCGCAAATGCCCTTCAACTACAACCAGCTTGAGGGGCGTTTCAAGCAGCTGCAAGATCAATACATGTGCGCGAGGCATTTTGCACTTCACACATTCAGCGATTTCACACATGCTCTCGTTTGCCATTACTGTAGTGCAGATGTTTGTGTTTTGAGTCTCATGCATCGCTTCTAACAACCCAAGCATGCATCATGCGTGCATGATAAGATTGCTCAAGTACAACTAGTATGAAACGAGTCATTTTAAATAAGCGACTCTGATATCAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01278230_01279369.mRNA True 671 mRNA 0.49 2 1278230 1279484

Neighbor

gene id symbol gene type direction distance location
CI01000306_01224349_01255175 NA coding upstream 22758 1224150 ~ 1255472 (+)
CI01000306_01209847_01210850 ACYP2 coding upstream 66998 1209395 ~ 1211232 (+)
CI01000306_01047698_01080329 TMEM63A, TMEM63B coding upstream 195971 1047698 ~ 1082259 (+)
CI01000306_01008614_01011977 RALB.S, RALBA, RALBB, RALB.L, RALB coding upstream 266253 1008614 ~ 1011977 (+)
CI01000306_00887579_00889885 NA coding upstream 387522 887190 ~ 890708 (+)
CI01000306_01293889_01308316 SPTBN1 coding downstream 14184 1293668 ~ 1308316 (+)
CI01000306_01308428_01312462 SPTBN1 coding downstream 28944 1308428 ~ 1312870 (+)
CI01000306_01315927_01321358 NA coding downstream 36048 1315532 ~ 1322294 (+)
CI01000306_01329678_01378388 EML6, EML5 coding downstream 50194 1329678 ~ 1378510 (+)
CI01000306_01387861_01391135 NA coding downstream 108118 1387602 ~ 1392321 (+)
G430113 NA non-coding upstream 8115 1236345 ~ 1270115 (+)
G430478 NA non-coding upstream 84270 1193748 ~ 1193960 (+)
G430477 NA non-coding upstream 85511 1192517 ~ 1192719 (+)
G430470 NA non-coding upstream 104324 1173686 ~ 1173906 (+)
G430467 NA non-coding upstream 109667 1168012 ~ 1168563 (+)
G430142 NA non-coding downstream 5206 1284690 ~ 1286761 (+)
G430182 NA non-coding downstream 9241 1288725 ~ 1289910 (+)
G430489 NA non-coding downstream 43579 1323063 ~ 1324428 (+)
G430492 NA non-coding downstream 105150 1384634 ~ 1384851 (+)
G430497 NA non-coding downstream 116268 1395752 ~ 1395970 (+)
G430452 NA other upstream 127292 1150597 ~ 1150938 (+)
G430409 NA other upstream 278328 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1040861 235447 ~ 242861 (+)
G430719 NA other downstream 868898 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1693672 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 2494660 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 2498568 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 2528749 3807268 ~ 3811243 (+)

Expression


Co-expression Network