CI01000306_01469486_01475137


Basic Information

Item Value
gene id CI01000306_01469486_01475137
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1468788 ~ 1475137 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01469486_01475137.mRNA
TTTAGCAGCATTCATAACCCGTCACATGTGGAAGAGTCGTGCGGGAATGTGATTCTGTGTTTGATATGCTACATGACTGTAAATGATGCAAAGAAACAGTCTCATGCTGGACTAAGAGCCGTTGTTCTGGGGTGGCAGAAATCTGACAAAGCCTCGGTGATAAACAGGCTTTTAGGTGATGAAGTTGAGTCTGACAAACATTTTGTGAAGTCTGTGAGGAAAGACGGTGACGTGAATGGAAGGAAGATAACTCTGATTAACACTCCATGCTGGTGGCAGATATTTAGTTTGCAGGATTCACCAGAGGTTGTGAAACAGGAGCTGGTTTGCAGTGTCTTCTTGTGTCCACCGGGGCCTCATGTCTTTCTCCTGGTCATTAACCTCAGTTTGCCTTTCACTGAAGAAAACAGACTCAGCATTGAGAAGCACTTTAGTCTGTTTGGTGAGAGAATCTGGAGACACACTATAGTGCTCTTTACACGAGCCGATTCACTGAAGGACAGAAACATTGAGCAGCACATAAAGAATCAAGATCTGCAGCAGATCATACAGAGATGTGGAGAAAGATATCACATCTTTGAGAATGAAAGTAAAAGTGCTGGAGTTCAAGAACTGCTTGACAAGATTGATGATGTTGTGGTAACAAACAGTGGCAAGCATTTTGAAACACATGATGACATGCTACTGGAGATAAAGAGAAAGAGAGATGAAAACGAAGGAAGAGCAAAAGCCAGACAAAAAATGTTGCAGGACAAAAGAGATCTGCTGAAAGAAATAGAAGCTGTGGCTCCTCTCTCAGAAACAAGGATTGTACTGCTTGGTTGGACCCTTTCTGGGAAGAGTTCAACCATACACACTATCTTCAATAATGAAAAAGTTAAAACAGAAGGGACAGAAAAGTGCCCAAAATATTCAAATGAAGTAAATGACAGAAAAATAACTGTGTTGGACACCCCAGGCTGGTGGAAATATTTCTCATCTAAATTCAACCCAAAGTTTGCTCAGGCTGCAATCCTGGAGAGCATCAGCCAATCACAGCATATGCAGTTCCCTCACGCCATTATCTTGGTGATTCCTGTTGATACTTCATTCAAGACTGAACAGAAATGTATCATTGAAGAGTATATGGCCATTCTTGGAGAAGACGTCTGGAGACACACCATAGTTCTGTTCACATGGGGCGACAGGATTCCAGACATATCAATCGAGCAGCACATTGAGAGTGAAGGTGACGCCCTCCAGTGGCTGATTGAGAAATGCAGGAACAGATATCACGTCTTTGACAACTCAGACAAGGAGAACAGAGATCAAGTCACAGAGCTGCTCCAGAAGATCGATGAGATGGTGGCAGAAAACAGTCTGTTTCGTTTCAACATACAGAAATACAGTGATCCAGAGAAAAGCCTTCAGAGAACTGAACACACAAGAAAACGCAAGAGAAAACAGAAGAATAAACAAGGAATAATGAAAAATCCAGATAATGTTCAAGCTCAAATCAGAGAGCTGCTCCAGAAGATCGATGAGATGGCGGCAAAAATCAGTCCATTCGGTCTCAACACACAATGTGCTGCAGAAGTGAACGTTCGTGTATCTGACGCACAACAAGACGAGGAAATAAGTCTGAATGCTGATAATGTTGCAGAATTAATAAACCAGGAGTTGAACAACAGGTGTAATGAGATCAAAAAGAAGATAAAGTTAAAGTTATTAGGGATGAATTTCTCTGCATATAGAGATGAAGAGTCAGACGCTGGTATAGAAGTGAAAAGTAACAGAAGCATGATAGACACTCCAAATTTGTCAGCTGATGAAAAACTCAAGGAGCTGTTAAGGAGAGAAGGAAGCAGATTTGAAGCAATTATAATGGATGGACTCTTTAACATTCTGCAGAATCCTGATGAAAACGTGAGACAAAGTTCAAATGAAAAGGTGATGATGTGGCTTCAACAAAGTGAGGAACAGCACATCAGAAACATCAAGACATGAAACAAGCTCAGTAGATCAACACGATCCAGAGACGTCAGATAATGCATCCAAACTTCAGATTCATTCACATTAGCAATACTTCAGTAAAAAATGATGTATGCCTGCAGTTTGCAGAGTAAAACATACACTCTGCTTAAAAATGTGATAAACATATGCTGTGTAACTTCAATTTGGTAATCATGTGTTAAATATGTGTGTTAATATTTCTAATTAATACTCAGAATTGTAAATGTATAATACTTTACATAAATGTAATTGAAATTTGAAGTCTAACTTAGAGTTATGATTTAGTCTGGTATAGTAACCTGTATCCTTTGATTTTGTGTCCCTTTTCCACTGTTATCTTTGAATTGATAAATTTGTATCACTTAAACTTCTATCAGAGATTTTTATGTTCATATAGTACTTTCTTTAAAAACATCACATAATGTTGGTCGTCAGTGACATCCTATTTCTTTAAAAACACCAGTGTTTGGGTTAGATTGCCCCTCCCCTAAATGCGCTTTGTCTCTATGGTTCATTTAGTATTTGTGGATCTATGCATATGCTAATTAGCCCCTTATGAATTTGCGCATGGTTTGTCTTAAAGTACATTAAAAACAGCACATAGACATATTAACAACATTAAAAAGTTGATTTTCACCACAGGGGGTCTTTAATGTTTTACATGATTGTATTTTTTCAGGTTAAAAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01469486_01475137.mRNA True 2684 mRNA 0.39 5 1468788 1475137

Neighbor

gene id symbol gene type direction distance location
CI01000306_01439864_01463150 NA coding downstream 5638 1439786 ~ 1463150 (-)
CI01000306_01284891_01287606 NA coding downstream 181158 1284677 ~ 1287630 (-)
CI01000306_01201604_01202608 FOXG1B coding downstream 264715 1200682 ~ 1204073 (-)
CI01000306_01120958_01127237 SULT6B1 coding downstream 341228 1120816 ~ 1127560 (-)
CI01000306_01109880_01112379 VIPB coding downstream 355985 1109779 ~ 1112803 (-)
CI01000306_01476783_01478195 NA coding upstream 1527 1476664 ~ 1478195 (-)
CI01000306_01483485_01492511 ATL2, ATL2.L coding upstream 7735 1482872 ~ 1492511 (-)
CI01000306_01502721_01504240 NA coding upstream 27529 1502666 ~ 1504240 (-)
CI01000306_01514599_01534002 HNRNPLL, HNRLL coding upstream 39218 1514355 ~ 1534002 (-)
CI01000306_01572341_01576690 NA coding upstream 97204 1572341 ~ 1576690 (-)
G431760 NA non-coding downstream 37222 1430802 ~ 1431566 (-)
G431774 NA non-coding downstream 38682 1429374 ~ 1430106 (-)
G431769 NA non-coding downstream 40493 1427998 ~ 1428295 (-)
G431886 NA non-coding downstream 43542 1425042 ~ 1425246 (-)
G431882 NA non-coding downstream 51449 1417038 ~ 1417339 (-)
G431890 NA non-coding upstream 28252 1503389 ~ 1503680 (-)
G431764 NA non-coding upstream 33449 1508586 ~ 1512270 (-)
G431732 NA non-coding upstream 150208 1625345 ~ 1626017 (-)
G431737 NA non-coding upstream 230212 1705349 ~ 1706071 (-)
G431746 NA non-coding upstream 252352 1727489 ~ 1732425 (-)
G431814 NA other downstream 156354 1311702 ~ 1312434 (-)
G431706 NA other downstream 305450 1163027 ~ 1163338 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 985139 482482 ~ 494090 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other upstream 242796 1717933 ~ 1726043 (-)
G432022 NA other upstream 1525099 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 3067586 4542723 ~ 4545244 (-)
G433450 NA other upstream 3886506 5361643 ~ 5383763 (-)
G433670 NA other upstream 4565877 6041014 ~ 6041283 (-)

Expression


Co-expression Network