CI01000306_01481595_01481955


Basic Information

Item Value
gene id CI01000306_01481595_01481955
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1481595 ~ 1482496 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01481595_01481955.mRNA
GAAAACACATCTGGATGGAATGATCGAAGCCGAGGAAGTTCATCTGTACAGCAGAGAGACAAAAATCATTGGTACAGTTCAGCGTTTTCAACTAGGTCCTCTACCGGTAACACTGCTCGAGGTCTTCCGGAGGACTGATGGAGGCCGAACGCTTCTCCAAGAACAAATACGGGACAGACGAGACGGACAGCATGGGAATGACATGAGAAAGAGGAAACCTGGTGAAAGACCCCGTGAAACCCCCAGAATCCTCCATCCGAGTGGGACAGAAGAGGGTGAACGTGCCGACCTGCGTTCACGGCGCACTTGGTTTCTTCAGCTGGAGCGTGACGCTGCTAAAACGGCTAGTTCCTCTTCTTGACGTTGTTGTTCGATGACAGTCTCTGTCGCTGTGTCGGCATCAGGGCGCCCAGCGTCACTTTGCTCCTGGCAACTTCAAAAAGTTTGGAAAAGACCTAAAACGAGGGATGAGTGTTAGTACCGCGCACACACATGCGTGTGATTTGAATGAAGAGGTCAGAGGCCACTAGAGGGCAGAGGTCACGTCTCACCTTCCTCGGCGTCCTCTGTGTGAGCGTGAAGTGAGAAGAGAGCGAGACGTTACAGAGACACACTACATTCGCTGACAGGTGTTTACTTAAACTAATTTCTCTTAACTTTAAGATGAGATAATGACATGAAATGTGGCAGGACATTCTGAAAACTGGCTTTTCATGTAGAAAATCAAACATACGCTGGTGATGAAGCTCTTCAGTATGAATTAAACATGAAATCTTCAGTAAACAATGTGTCTAAATCATTATGAGGTGGAGCTACTGTTCTGTGTGAATGAACATCTGGTTCTGGGGACCGATATGATGGGAAATATTACAAATATTACAACTCTATAGTCGTTTGGTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01481595_01481955.mRNA True 902 mRNA 0.47 1 1481595 1482496

Neighbor

gene id symbol gene type direction distance location
CI01000306_01429843_01430151 NA coding upstream 51320 1427779 ~ 1430275 (+)
CI01000306_01387861_01391135 NA coding upstream 89274 1387602 ~ 1392321 (+)
CI01000306_01329678_01378388 EML6, EML5 coding upstream 103085 1329678 ~ 1378510 (+)
CI01000306_01315927_01321358 NA coding upstream 159301 1315532 ~ 1322294 (+)
CI01000306_01308428_01312462 SPTBN1 coding upstream 168725 1308428 ~ 1312870 (+)
CI01000306_01578460_01578838 NA coding downstream 95964 1578460 ~ 1579027 (+)
CI01000306_01627469_01632656 RFC4 coding downstream 144973 1627469 ~ 1632729 (+)
CI01000306_01639496_01661857 ANKRD13C.S, ANKRD13C, ANKRD13C.L coding downstream 156569 1639065 ~ 1663148 (+)
CI01000306_01679537_01704400 NA coding downstream 197041 1679537 ~ 1704951 (+)
CI01000306_01811531_01821737 NA coding downstream 329035 1811531 ~ 1821864 (+)
G430161 NA non-coding upstream 41622 1437095 ~ 1439973 (+)
G430515 NA non-coding upstream 50108 1431089 ~ 1431487 (+)
G430509 NA non-coding upstream 65989 1415207 ~ 1415606 (+)
G430504 NA non-coding upstream 73035 1408330 ~ 1408560 (+)
G430533 NA non-coding downstream 20893 1503389 ~ 1503601 (+)
G430534 NA non-coding downstream 24133 1506629 ~ 1506862 (+)
G430133 NA non-coding downstream 46656 1529152 ~ 1531757 (+)
G430549 NA non-coding downstream 110657 1593153 ~ 1593740 (+)
G430554 NA non-coding downstream 134578 1617074 ~ 1617414 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 263038 1209395 ~ 1211232 (+)
G430452 NA other upstream 330657 1150597 ~ 1150938 (+)
G430409 NA other upstream 481693 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1244226 235447 ~ 242861 (+)
G430719 NA other downstream 665886 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1490660 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 2291648 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 2295556 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 2325737 3807268 ~ 3811243 (+)

Expression


Co-expression Network