CI01000306_01502721_01504240


Basic Information

Item Value
gene id CI01000306_01502721_01504240
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1502666 ~ 1504240 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01502721_01504240.mRNA
GGAGGACGATTGTTGGGCTTATAGTGTCAGTGATAGAGGGATATTCAGTCACTCTAGACTTTGATCATAATGAAATGAAGGATGATGATCATATTCAGTGGATGTTTGGAACTGAAAACACTGTAATAGCTGAAATCAAGCGATTCAACATAACTGTATATGATGATGTTCTTGATGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTTTGACCATCACAGACATCAGAACTGAACATGATGGAGTTTATAGAATATTTAACAACCATGTGAACATACATTTCGTGCTTGCTGTCTATGCTGAAATCAATAAACGGTACAACAGAATCGCTGATGATGCTCATGATGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAGACATCAGAACTGAACATGCTGGAGATTATAAACTACAAATTGCAATTTGGAAAACATCATTAAAAGCTTTCAGAGTTTCTGTCAATGACTCCGTCCACTGTTGTGGTCCTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACTGTCATTATTCTGGTTTATGACATCAGATCCAGAAGAGCTGAACAAGATCAAGCACATATTCACACTTCAGAAATCTAATTGTTGTCATTTCTCACAAACTTGTTTTGCATATATATTTGTGAGATTTGATAAA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01502721_01504240.mRNA True 711 mRNA 0.39 3 1502666 1504240

Neighbor

gene id symbol gene type direction distance location
CI01000306_01483485_01492511 ATL2, ATL2.L coding downstream 10155 1482872 ~ 1492511 (-)
CI01000306_01476783_01478195 NA coding downstream 24471 1476664 ~ 1478195 (-)
CI01000306_01469486_01475137 NA coding downstream 27529 1468788 ~ 1475137 (-)
CI01000306_01439864_01463150 NA coding downstream 39516 1439786 ~ 1463150 (-)
CI01000306_01284891_01287606 NA coding downstream 215036 1284677 ~ 1287630 (-)
CI01000306_01514599_01534002 HNRNPLL, HNRLL coding upstream 10115 1514355 ~ 1534002 (-)
CI01000306_01572341_01576690 NA coding upstream 68101 1572341 ~ 1576690 (-)
CI01000306_01580628_01611787 SOS1 coding upstream 76134 1580374 ~ 1611787 (-)
CI01000306_01633237_01635512 HRASLS coding upstream 128833 1633073 ~ 1636773 (-)
CI01000306_01665458_01676209 NA coding upstream 160557 1664797 ~ 1676223 (-)
G431760 NA non-coding downstream 71100 1430802 ~ 1431566 (-)
G431774 NA non-coding downstream 72560 1429374 ~ 1430106 (-)
G431769 NA non-coding downstream 74371 1427998 ~ 1428295 (-)
G431886 NA non-coding downstream 77420 1425042 ~ 1425246 (-)
G431882 NA non-coding downstream 85327 1417038 ~ 1417339 (-)
G431764 NA non-coding upstream 4346 1508586 ~ 1512270 (-)
G431732 NA non-coding upstream 121105 1625345 ~ 1626017 (-)
G431737 NA non-coding upstream 201109 1705349 ~ 1706071 (-)
G431746 NA non-coding upstream 223249 1727489 ~ 1732425 (-)
G431757 NA non-coding upstream 228505 1732745 ~ 1740620 (-)
G431814 NA other downstream 190232 1311702 ~ 1312434 (-)
G431706 NA other downstream 339328 1163027 ~ 1163338 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 1019017 482482 ~ 494090 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other upstream 213693 1717933 ~ 1726043 (-)
G432022 NA other upstream 1495996 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 3038483 4542723 ~ 4545244 (-)
G433450 NA other upstream 3857403 5361643 ~ 5383763 (-)
G433670 NA other upstream 4536774 6041014 ~ 6041283 (-)

Expression


Co-expression Network