CI01000306_01578460_01578838


Basic Information

Item Value
gene id CI01000306_01578460_01578838
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1578460 ~ 1579027 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01578460_01578838.mRNA
TGTGGTGCTGGTGAGCTTCCTAGAGCATGTGCGTCCATCAGTAAAGGTGATTCTGGGTCACGCGGTGACAGACGTTCAGATCCTCGGGAGTGGAACGGAGGAGACGGAGAGACAAATGAAGAGCTTGTTCCTGCCGGACAGAACGCAGGTCCTCAGCACGGAGGAACTGAAGTCACGGAGGGAGAATCTGCGTCTGTGGCTGGAGAAGAACAGAGTCCCGGTGACTGAAGACGGGGATGTTCTTCGTGTGGCGAGCGTGCTGACCATCAGCGCCCCCTACGGCACTGGAGACTGCAGCTGCGCCAATGAGATCATCCTGGCAAGAGTGCAGAGTCTAGTTGAGAGCGTCCCTGGAGCAGAACACACTTCACTGTCCTAAACAAACTTTACTCTGACAGGCATGACATCACCGTTACAACCTGTTCACACGTTCTGAGAGTGTTCGTTAAGATGAGACGTTAACGCATGATGTTCAGGGTGGAAAGTTACATTATGTAAATATTTACGTTTTTGATTCTTTATGTAACATTCAAAGTTATTGTATGTTTGTTTCCTGATGAATGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01578460_01578838.mRNA True 568 mRNA 0.50 1 1578460 1579027

Neighbor

gene id symbol gene type direction distance location
CI01000306_01481595_01481955 NA coding upstream 95964 1481595 ~ 1482496 (+)
CI01000306_01429843_01430151 NA coding upstream 148185 1427779 ~ 1430275 (+)
CI01000306_01387861_01391135 NA coding upstream 186139 1387602 ~ 1392321 (+)
CI01000306_01329678_01378388 EML6, EML5 coding upstream 199950 1329678 ~ 1378510 (+)
CI01000306_01315927_01321358 NA coding upstream 256166 1315532 ~ 1322294 (+)
CI01000306_01627469_01632656 RFC4 coding downstream 48442 1627469 ~ 1632729 (+)
CI01000306_01639496_01661857 ANKRD13C.S, ANKRD13C, ANKRD13C.L coding downstream 60038 1639065 ~ 1663148 (+)
CI01000306_01679537_01704400 NA coding downstream 100510 1679537 ~ 1704951 (+)
CI01000306_01811531_01821737 NA coding downstream 232504 1811531 ~ 1821864 (+)
CI01000306_01854835_01855388 NA coding downstream 275808 1854835 ~ 1855560 (+)
G430133 NA non-coding upstream 46703 1529152 ~ 1531757 (+)
G430534 NA non-coding upstream 71598 1506629 ~ 1506862 (+)
G430533 NA non-coding upstream 74859 1503389 ~ 1503601 (+)
G430161 NA non-coding upstream 138487 1437095 ~ 1439973 (+)
G430515 NA non-coding upstream 146973 1431089 ~ 1431487 (+)
G430549 NA non-coding downstream 14126 1593153 ~ 1593740 (+)
G430554 NA non-coding downstream 38047 1617074 ~ 1617414 (+)
G430555 NA non-coding downstream 38711 1617738 ~ 1617989 (+)
G430135 NA non-coding downstream 46289 1625316 ~ 1626000 (+)
G430082 NA non-coding downstream 126344 1705371 ~ 1706072 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 359903 1209395 ~ 1211232 (+)
G430452 NA other upstream 427522 1150597 ~ 1150938 (+)
G430409 NA other upstream 578558 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1341091 235447 ~ 242861 (+)
G430719 NA other downstream 569355 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1394129 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 2195117 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 2199025 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 2229206 3807268 ~ 3811243 (+)

Expression


Co-expression Network