CI01000306_01854835_01855388


Basic Information

Item Value
gene id CI01000306_01854835_01855388
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1854835 ~ 1855560 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01854835_01855388.mRNA
ATAAAGAATGTGATGTTCCTCATACCAAACAGCCAAGTGAAGAAAACCCAAAAAATACAAGTGTGCAACTTGCATCACTTAATGCTGATGTAATCAAAACAAGTATGATTGACACATTTGACAGACCAGGAGATGCCTATACAGAAAGCAAGTATGCTCGAGCTGGAACATATAAGATAGATCCTGAAAACCAACCAGGAATGAGGATTCCCAAGACTGGAGCTTATGCAGAAGCAGGAGTTGGACGAGCTCGTGCTGAATACAGAGTATTTGAAGCTGAAGCCAAAGGTCCCAACGCCGCAGCTGGAGCTGAAGCCAGTGTGGTTGGACTCGGAGCAATGGCTCGAGCTGAAATTGCCAGTGCATCAGCTAAAGCCGGTCCAGTTGGTGTGAAATTAGGACTTGGAGTTGATACGGGCGCATCTGCTGGTCTGGGAGGGGTGGAGGTAAAAGTCTTGGGAACTGGAATCTCAATTGGTACAGGAATTGGTGTAGCTGTTCTGGGTAACGAAGTAGAAGTAAATTGTGCAATCATGTATTCATACAGATATTAATTACTTTCAAATATTTGTTATGTGAAGACAAAAACCTGTTTGTTTGTATTTGGTTATGCAGGTGTGTGTATTGCCTTTCTTTATACTGTCATTCCCTGTGAATATCTTATGTGTTCACAAAACTTTCTAGAGATTTTAGACTTTTGCACATCATATTTTTTCCATTTATGCA

Function

NR:

description
reproduction regulator 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01854835_01855388.mRNA True 726 mRNA 0.41 1 1854835 1855560

Neighbor

gene id symbol gene type direction distance location
CI01000306_01811531_01821737 NA coding upstream 32971 1811531 ~ 1821864 (+)
CI01000306_01679537_01704400 NA coding upstream 149884 1679537 ~ 1704951 (+)
CI01000306_01639496_01661857 ANKRD13C.S, ANKRD13C, ANKRD13C.L coding upstream 191687 1639065 ~ 1663148 (+)
CI01000306_01627469_01632656 RFC4 coding upstream 222106 1627469 ~ 1632729 (+)
CI01000306_01578460_01578838 NA coding upstream 275808 1578460 ~ 1579027 (+)
CI01000306_01856805_01857982 NA coding downstream 1153 1856713 ~ 1858163 (+)
CI01000306_01871685_01875161 NA coding downstream 16010 1871570 ~ 1875301 (+)
CI01000306_01880262_01881242 NA coding downstream 24628 1880188 ~ 1881438 (+)
CI01000306_01885017_01886202 NA coding downstream 29358 1884918 ~ 1886594 (+)
CI01000306_01887307_01897613 NA coding downstream 31508 1887068 ~ 1897981 (+)
G430585 NA non-coding upstream 44300 1810079 ~ 1810535 (+)
G430569 NA non-coding upstream 90349 1764254 ~ 1764486 (+)
G430153 NA non-coding upstream 140585 1712697 ~ 1714250 (+)
G430082 NA non-coding upstream 148763 1705371 ~ 1706072 (+)
G430135 NA non-coding upstream 228835 1625316 ~ 1626000 (+)
G430598 NA non-coding downstream 22821 1878381 ~ 1883427 (+)
G430603 NA non-coding downstream 43305 1898865 ~ 1899107 (+)
G430605 NA non-coding downstream 47559 1903119 ~ 1904347 (+)
G430599 NA non-coding downstream 49917 1905477 ~ 1906644 (+)
G430611 NA non-coding downstream 80025 1935585 ~ 1989749 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 636278 1209395 ~ 1211232 (+)
G430452 NA other upstream 703897 1150597 ~ 1150938 (+)
G430409 NA other upstream 854933 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1617466 235447 ~ 242861 (+)
G430719 NA other downstream 292822 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1117596 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 1918584 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 1922492 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 1952673 3807268 ~ 3811243 (+)

Expression


Co-expression Network