CI01000306_01859514_01870761


Basic Information

Item Value
gene id CI01000306_01859514_01870761
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1859005 ~ 1870822 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01859514_01870761.mRNA
ACAACAAGGTGAGGAAATAAGTCTGAACACTGACCAGTTACTGAAATCGATGAACCACGAGATGAAAAACAGGCGTAAAGAGATCAAAAGGAAGCTAGAAGAATTAGGGATGGATTTCAGTGGATGTAAAGAAATAACCATAGAACATCCTCCAGATGGACTAAGAGCCGTTGTTCTGGGGTGGCAGAAATCTGACAAAGCCTCGGTGATAAACAGCATTTTAGGTGGGGAAGTTGAGTCTAACAAACATTTTGTGAGGTCTGTGAGGAAAGACGGTGAAGCGAATGGAAGGAAGATAACCCTGATTAACACTCCATGCTGGTGGGAGAATTTTGTTTTGAAAGATTCACCAGAGGTTGTGAAACAGGAAATGGTTTGCAGTGTCTTCCTGTGTCTACCGGGGCCTCATGTTTTTCTACTTGTCATTAACCTCAGTTTGCCTTTCACTGAAGAAAACAGACTCAGCATTGAGAAGCACCTTAGTCTGTTTGGTGAGAGAATCTGGAGACACACTATAGTGCTCTTTACACGAGCCGATTCACTGAAGGACAGAAACATTGAGCAGCACATAAAGAATCAAGATCTGCAGCAGATCATACAGAGATGTGGAGAAAGATATCACATCTTTGATTTCAAAAACAAAAGTGCTGGAGTTCAAGAACTGCTTGACAAGATTGATGATGTTGTGGCAGCAAACAGTGGCAAGCATTTTGAAACACATAATGACATGCTACTGGAGATAAAGAGAAAGAGAGATGAAAACGAAGTAAGAGCAAAAGCAGGACAAAAAATGTTGCAGGACAAAAGAGATCTGCTGAAAGAAATAAAAGCTGTGGCTCCGCTCTCAGAACTGAGAATTGTCCTGCTGGGTTGGACTCTGTCTGGGAAGAGTTCAACCGGAAACACCATCTTCAATCATGAAATATTTCAGATAGGAAAATCACAAAAGGGTACAAACCATACTGGAGATGTAAATGGCAGAAAAATAACTGTGTTGAACACCCCAAGCTGGTGGAAATATTTCTCATCTAAATTCAACCCAAAGTTTGCTCAGGCTGCAATCCTGGAGAGCATCAGCCAATCACAACATATGCAGTTCCCTCACGCCATGATCTTGGTGATTCCTGTTGATACTTCATTCAAGAATGAACAGAAAAGAATCATTGAAGAGTATATGGCCATTCTTGGAGAAGACGTCTGGAGACACACCATAGTTCTGTTCACATGGGGCGACAGGTTTCCAGACATATCAATCGAGCATCACATTGAGAGTGAAGGTGGCGCCCTCCAGTGGCTGATTAAGAAATGCAGGAACAGATATCACGTCTTTGACAACTCAGACAAGAAGAACAGAGATCAAGTCACAGAGCTGCTCCAGAAGATCGATGAGATGGTGACAGAAAACAGTCTGTTCTGTCTCAAAACTCAGTGTGCAGCAGAAGTGAATGTTCATGAGACAGATACAGAGGAAGAAATAAGTCTGGATACAGAGGAAGTATTGAGTCTGGACACAGACCATGTGCTGAAATTACTGTACCAGGAGATTAACAACAGGTTTAAGAGGGTCACGAGTAAACTAAAACACTTAGGGATGGATTTTACTGAATGTATAGAGGCCAAAAGTGATCGTAGCATGCCAGAGCCTCTAAACTTGTCAGCTGATGAAAGACTCATGGAGATGATAAGGAGAGAAGGAAGCAGATGGGAAGTCATTTTAATGGACAGCATCTTGAGCATTCAGAATGCTGAAGCATCTTCTGATGGAAATATGAGTCCAAGTTCAAGTGATATTGTGTTGAGGTGGTTTGAAAGATGCGATGAATACTACTCATTTGGATGTGGAACAAGTATTCTAGAAGATCCAGAGCCCAGAGACATAAAAAGACGTAAAACACAGTTTGCAGAATAAAACTCTCTGTTTAAACTTGTTTTACACAAGTGCAAAATACAAACTATTTGTTTAGAATGCATTTAATAATTATATGAGAAATAGCCTATTTCTAATAATTGATAATAAGTGGTATTTTTCTATGATATCTAAAAACTATATTACTTCACATTATTTTTGTCATGAAAATGTAAATTTAGATTGAACAATCACGTTTAGTTTCAGTCTTCGTTCCATGTTTTCTTTGTTCTTGTTACCAGTTTGTTTCAGTTACTCATCACATGTCTTGTTTAGTCACTCGTTTATCCTGTGTGCTGTATAAATGCCATCAGTTTTTTATTCCTGTTTTCTTGTATTATCTGGTATTGGTTTGTAGCAAAGCTGTTAACAGTTTTCTCTGCCTTAGAAGGCAGCCTTTTGTTTTGTTTGCTTAACAAAGGTAAACTTCTGCATCAAGATCCACCTTTCCTGTCCTTACCTCGAACGCCGCTGTAAAAGATTTAGTCCAATTCAATGAACAGTTAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01859514_01870761.mRNA True 2418 mRNA 0.39 5 1859005 1870822

Neighbor

gene id symbol gene type direction distance location
CI01000306_01826418_01844251 MFN1B coding downstream 14754 1826097 ~ 1844251 (-)
CI01000306_01792788_01804803 ASPSCR1 coding downstream 54202 1792788 ~ 1804803 (-)
CI01000306_01775235_01776152 NA coding downstream 82573 1775197 ~ 1776432 (-)
CI01000306_01756353_01763570 PYCR1B, PYCR1.L, PYCR1, PYCR1A, PYCR2 coding downstream 94759 1756175 ~ 1764246 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG coding downstream 132962 1717933 ~ 1726043 (-)
CI01000306_01905901_01906725 NA coding upstream 34876 1905698 ~ 1907020 (-)
CI01000306_01927392_02010649 FLNB coding upstream 56511 1927333 ~ 2010774 (-)
CI01000306_02022802_02080261 SLMAP, SLMAPA coding upstream 151980 2022802 ~ 2080261 (-)
CI01000306_02107105_02108186 ARF4B, ARF4 coding upstream 236072 2106894 ~ 2108266 (-)
CI01000306_02123270_02125888 PDE12 coding upstream 251894 2122716 ~ 2126015 (-)
G431918 NA non-coding downstream 48946 1809843 ~ 1810059 (-)
G431916 NA non-coding downstream 51937 1806845 ~ 1807068 (-)
G431913 NA non-coding downstream 72749 1785585 ~ 1786256 (-)
G431747 NA non-coding downstream 104501 1753414 ~ 1754504 (-)
G431757 NA non-coding downstream 118385 1732745 ~ 1740620 (-)
G431933 NA non-coding upstream 28043 1898865 ~ 1899107 (-)
G431777 NA non-coding upstream 31826 1902648 ~ 1924550 (-)
G431935 NA non-coding upstream 44732 1915554 ~ 1921585 (-)
G431937 NA non-coding upstream 100636 1971458 ~ 1972195 (-)
G431814 NA other downstream 546571 1311702 ~ 1312434 (-)
G431706 NA other downstream 695667 1163027 ~ 1163338 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 1375356 482482 ~ 494090 (-)
G432022 NA other upstream 1129414 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 2671901 4542723 ~ 4545244 (-)
G433450 NA other upstream 3490821 5361643 ~ 5383763 (-)
G433670 NA other upstream 4170192 6041014 ~ 6041283 (-)
G433985 NA other upstream 4325285 6196107 ~ 6197210 (-)

Expression


Co-expression Network