CI01000306_01887307_01897613


Basic Information

Item Value
gene id CI01000306_01887307_01897613
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1887068 ~ 1897981 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01887307_01897613.mRNA
GTTTAAATAGAGAGTTGTATTCTGCAAAAAAAATTTCCGCAACTTTATGTCTCTGGACTCTGGATCTTCTACTGATGATGAAGCTTGTTCCACATCCAAATGAGCTGCAGTATTCATCGCATCTACCTCAACACATTATCACTTGAACATGGACTCATATTTTTATGAATATGAAAATGTGAGGGGTAGAAAATGTGATCTCAGGTTAGTCCAACACAATTATTTTATGCTATGTAAAAATGAAGAAAAAATGTGTCCTTCAAGTAATGAAAATCCAGATCAAACTTCCCAAGAAAACAGATGAAGAATGTGACGTACCTCCTGAGGAACAGTCAAGGACAGGAAGACACAAGATAACATGGAAAAACAAAAAGGGTGGTACAAAAAAGCCTAGGGTGCAACTTGCCTCAGTTAATGTTGATGTGATCGACACGATTAATATGATTGACACATTTGACAGACCAGGAGGTGCCTTTGCAGAAAGCAACTATGCTCGAAGTGGAACATATGCGTCAGCTTTTGAAAATGAACCAGGAAAGAGGATTCCCAAGATCGGAGCTTATGCAGAAGCAGGAGTTGGACGAGCTCGTGCTGAATACAGAGTACTCGAGGCTGAAGCCAAAGGTCCCAACGCCTCAGCTGGAGCTGAAGCCAGTGTGATTGGAGTCGGAGCAATGGCTCGAGCTGAAATTGCCAGCGCATCGGCTAAAGCCGGTCCAGTTGGTGTGAAATTGGGACTTGGAGTTGATACGGGTGCATCTATTGGTCTGGGAGGGGTGGAGGCCAAAGTACTGGGAACTGGATTCTCAATTGGTCCAAAAACCAGTGTATCTGTTCTGGGTTCAGAAGTAAAAGTGTCATGTGCAATCATGTAGTCATACAGGTATTAATTACTTTTGAATATTATATGTGAAACCATGAAGACAAAAACCTGAGTTTTTTTATACTTTAACAATATAGTGACATGTTTTATTTTATAATTCTACAACTGCTGAGACTTGTTTTCATTTGAAAATAATCATATCTGGTTATGTGTTTTGCTTTTTCTCATCAGTACTATCATTCCCAGTGGATAAGATTGTTGGGTGAAACCTGAAAAAACATTTTTTACCCATTTTTAATACAGTATCAGTATTGTTGTTGAGTTATAAATATGCAGTTATACTTCAACAATATGGAAACATATGTTTTATTTTATATGTTATAATCCTACAACTGTTGAGACTTTTGTTTTCATTTAAGA

Function

NR:

description
reproduction regulator 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01887307_01897613.mRNA True 1243 mRNA 0.38 2 1887068 1897981

Neighbor

gene id symbol gene type direction distance location
CI01000306_01885017_01886202 NA coding upstream 474 1884918 ~ 1886594 (+)
CI01000306_01880262_01881242 NA coding upstream 5630 1880188 ~ 1881438 (+)
CI01000306_01871685_01875161 NA coding upstream 11767 1871570 ~ 1875301 (+)
CI01000306_01856805_01857982 NA coding upstream 28905 1856713 ~ 1858163 (+)
CI01000306_01854835_01855388 NA coding upstream 31508 1854835 ~ 1855560 (+)
CI01000306_01907357_01910697 NA coding downstream 9290 1907271 ~ 1911561 (+)
CI01000306_02082508_02100892 DENND6AA, DENND6A coding downstream 184527 2082508 ~ 2100892 (+)
CI01000306_02109241_02110274 ARF4B coding downstream 211145 2109126 ~ 2110875 (+)
CI01000306_02112910_02114040 ARF4B coding downstream 214834 2112815 ~ 2114420 (+)
CI01000306_02116775_02121990 ARF4A, ARF5, ARF4 coding downstream 218391 2116372 ~ 2122477 (+)
G430598 NA non-coding upstream 3641 1878381 ~ 1883427 (+)
G430145 NA non-coding upstream 21535 1846063 ~ 1865533 (+)
G430585 NA non-coding upstream 76533 1810079 ~ 1810535 (+)
G430569 NA non-coding upstream 122582 1764254 ~ 1764486 (+)
G430153 NA non-coding upstream 172818 1712697 ~ 1714250 (+)
G430603 NA non-coding downstream 884 1898865 ~ 1899107 (+)
G430605 NA non-coding downstream 5138 1903119 ~ 1904347 (+)
G430599 NA non-coding downstream 7496 1905477 ~ 1906644 (+)
G430611 NA non-coding downstream 37604 1935585 ~ 1989749 (+)
G430632 NA non-coding downstream 105721 2003702 ~ 2029292 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 668511 1209395 ~ 1211232 (+)
G430452 NA other upstream 736130 1150597 ~ 1150938 (+)
G430409 NA other upstream 887166 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1649699 235447 ~ 242861 (+)
G430719 NA other downstream 250401 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1075175 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 1876163 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 1880071 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 1910252 3807268 ~ 3811243 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location