CI01000306_02109241_02110274 (ARF4B)


Basic Information

Item Value
gene id CI01000306_02109241_02110274
gene name ARF4B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 2109126 ~ 2110875 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_02109241_02110274.mRNA
CTATATAAACACTCACACACTCACACCATCCTCACACTAACAATCTGAGCCTCGTCCTCTGGACATTTATTTTCACTAAATACAGCAAACATCTTTTTCATCTGCACTTTTCAAAATGGGCGTCTTCTTCTCTCACATTTTCTCACGTCTCTTGAAGAAAAAAGAGATGAGGTTGCTTATGGTTGGTCTGGATGCAGCAGGGAAAACAACAATCCTCTACAAACTCAAACTTGGTGAAGTTGTCTCATCTATTCCAACTATTGGTTTTAATGTTGAGACAGTTGAATATAAAAACATCTCCTTCACGGTTTGGGATGTTGGTGGTCAGAGTGTCATCAGAGGCCTCTGGAGACATTACTATCAGAACACCAAGGGTCTGATCTTTGTGGTGGACACCAGTGATCATGACAGGATTGAAATGGCAGCAGAAGAACTAAATATGATGATGGCGGAGGATGAGATGAGAGACGTTGTTCTGTTAGTTCTCGCTAACAAGCAGGATTTACCCAAAGCCATGGCAGTCCACGAGCTGACAGAGAGACTGGGTTTACACGCACTGAGAGGAAGACAGTGGTTCGTTCAGCCCACATGTGCGGTTCAAGGGTCAGGGTTATATGAAGGACTGGACTGGCTCTCGGATCAACTGTCCAAACAACAATAAAGCAAAGTCGACATGAAACGGAAGTTGCAATAGTCTTTCTTCCCTATTGTGACGTATATCCGAGTGAAACGGCTTCTGGAACAAGAACAAACAGGACGCGGCTCGATTACTGGCGCCAGTAAACTCGTCATCAGAGAAGAGATGTCGCTGCAAGAGGAAGGAGAAGTTATTCTGATTAAAGGATAATTTAAGATAAATCATTTATAATAAATACTGCAATATTCCATAAACAACAAGAATTGTCCATTTTGATTTCATGGTCACTTTAATACTTTATTTTTGTGGACTGATACTTGAATACATGCTGTATATATTACGACAGCCTCCAACTGTTTATTATCTCAAAAGCATTTTGATTTATTAATGTTAAATTAAAACTGATATTTTAAATTGTTAGTCTTACTTTTGAAAAAAATTGTTATATAATTTTTTTTAAATTGTTGTTCTATTGACTTTGAAAGAGTTTGTCATGTTTCAGTATGTGTTCTGTTGTATTTGCACTTTGAAAGAACGACCTGATGTCTGCCTGTAATATTTATCTGTGCCTTTCAAATATCTCCAATACATGATGTATTTATTTACAATGTTTCACACTCATTTA

Function

symbol description
arf4b Predicted to enable GTP binding activity. Is expressed in brain; eye; forebrain; and midbrain. Orthologous to human ARF4 (ADP ribosylation factor 4).

NR:

description
ADP-ribosylation factor 4

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_02109241_02110274.mRNA True 1262 mRNA 0.38 5 2109126 2110875

Neighbor

gene id symbol gene type direction distance location
CI01000306_02082508_02100892 DENND6AA, DENND6A coding upstream 8234 2082508 ~ 2100892 (+)
CI01000306_01907357_01910697 NA coding upstream 197565 1907271 ~ 1911561 (+)
CI01000306_01887307_01897613 NA coding upstream 211145 1887068 ~ 1897981 (+)
CI01000306_01885017_01886202 NA coding upstream 222532 1884918 ~ 1886594 (+)
CI01000306_01880262_01881242 NA coding upstream 227688 1880188 ~ 1881438 (+)
CI01000306_02112910_02114040 ARF4B coding downstream 1940 2112815 ~ 2114420 (+)
CI01000306_02116775_02121990 ARF4A, ARF5, ARF4 coding downstream 5497 2116372 ~ 2122477 (+)
CI01000306_02140523_02142280 RS23, RPS23.L, BRAFLDRAFT_130085, RPS23, RPS23-PS2 coding downstream 28620 2139495 ~ 2142301 (+)
CI01000306_02156224_02158555 ASB14 coding downstream 45349 2156224 ~ 2158721 (+)
CI01000306_02160784_02174325 APPL1 coding downstream 49909 2160784 ~ 2175204 (+)
G430632 NA non-coding upstream 79834 2003702 ~ 2029292 (+)
G430611 NA non-coding upstream 119377 1935585 ~ 1989749 (+)
G430599 NA non-coding upstream 202482 1905477 ~ 1906644 (+)
G430605 NA non-coding upstream 204779 1903119 ~ 1904347 (+)
G430603 NA non-coding upstream 210019 1898865 ~ 1899107 (+)
G430739 NA non-coding downstream 48587 2159462 ~ 2192381 (+)
G430745 NA non-coding downstream 159902 2270777 ~ 2285286 (+)
G430805 NA non-coding downstream 241836 2352711 ~ 2352939 (+)
G430811 NA non-coding downstream 275409 2386284 ~ 2386558 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 890569 1209395 ~ 1211232 (+)
G430452 NA other upstream 958188 1150597 ~ 1150938 (+)
G430409 NA other upstream 1109224 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1871757 235447 ~ 242861 (+)
G430719 NA other downstream 37507 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 862281 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 1663269 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 1667177 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 1697358 3807268 ~ 3811243 (+)

Expression


Co-expression Network