Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000306_02112910_02114040 |
| gene name | ARF4B |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 2112815 ~ 2114420 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| arf4b | Predicted to enable GTP binding activity. Is expressed in brain; eye; forebrain; and midbrain. Orthologous to human ARF4 (ADP ribosylation factor 4). |
| id | name | namespace |
|---|---|---|
| GO:0000166 | nucleotide binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000306_02112910_02114040.mRNA | False | 1018 | mRNA | 0.37 | 6 | 2112815 | 2114420 |
| TU493869 | True | 303 | lncRNA | 0.45 | 3 | 2113605 | 2114102 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_02109241_02110274 | ARF4B | coding | upstream | 1940 | 2109126 ~ 2110875 (+) |
| CI01000306_02082508_02100892 | DENND6AA, DENND6A | coding | upstream | 11923 | 2082508 ~ 2100892 (+) |
| CI01000306_01907357_01910697 | NA | coding | upstream | 201254 | 1907271 ~ 1911561 (+) |
| CI01000306_01887307_01897613 | NA | coding | upstream | 214834 | 1887068 ~ 1897981 (+) |
| CI01000306_01885017_01886202 | NA | coding | upstream | 226221 | 1884918 ~ 1886594 (+) |
| CI01000306_02116775_02121990 | ARF4A, ARF5, ARF4 | coding | downstream | 1952 | 2116372 ~ 2122477 (+) |
| CI01000306_02140523_02142280 | RS23, RPS23.L, BRAFLDRAFT_130085, RPS23, RPS23-PS2 | coding | downstream | 25075 | 2139495 ~ 2142301 (+) |
| CI01000306_02156224_02158555 | ASB14 | coding | downstream | 41804 | 2156224 ~ 2158721 (+) |
| CI01000306_02160784_02174325 | APPL1 | coding | downstream | 46364 | 2160784 ~ 2175204 (+) |
| CI01000306_02177474_02180692 | HESX1 | coding | downstream | 62986 | 2177406 ~ 2180840 (+) |
| G430632 | NA | non-coding | upstream | 83523 | 2003702 ~ 2029292 (+) |
| G430611 | NA | non-coding | upstream | 123066 | 1935585 ~ 1989749 (+) |
| G430599 | NA | non-coding | upstream | 206171 | 1905477 ~ 1906644 (+) |
| G430605 | NA | non-coding | upstream | 208468 | 1903119 ~ 1904347 (+) |
| G430603 | NA | non-coding | upstream | 213708 | 1898865 ~ 1899107 (+) |
| G430739 | NA | non-coding | downstream | 45042 | 2159462 ~ 2192381 (+) |
| G430745 | NA | non-coding | downstream | 156357 | 2270777 ~ 2285286 (+) |
| G430805 | NA | non-coding | downstream | 238291 | 2352711 ~ 2352939 (+) |
| G430811 | NA | non-coding | downstream | 271864 | 2386284 ~ 2386558 (+) |
| G430834 | NA | non-coding | downstream | 367686 | 2482106 ~ 2483041 (+) |
| CI01000306_01209847_01210850 | ACYP2 | other | upstream | 894258 | 1209395 ~ 1211232 (+) |
| G430452 | NA | other | upstream | 961877 | 1150597 ~ 1150938 (+) |
| G430409 | NA | other | upstream | 1112913 | 925544 ~ 999902 (+) |
| CI01000306_00235686_00242814 | NA | other | upstream | 1875446 | 235447 ~ 242861 (+) |
| G430719 | NA | other | downstream | 33962 | 2148382 ~ 2150954 (+) |
| CI01000306_02974291_02976718 | TP53INP2 | other | downstream | 858736 | 2973156 ~ 2979157 (+) |
| CI01000306_03772689_03777211 | DYNLRB1 | other | downstream | 1659724 | 3772689 ~ 3777550 (+) |
| CI01000306_03778075_03781910 | MAP1LC3A, MAP1LC3A.L | other | downstream | 1663632 | 3778052 ~ 3783019 (+) |
| CI01000306_03807268_03810946 | NA | other | downstream | 1693813 | 3807268 ~ 3811243 (+) |
