CI01000306_02183898_02186529


Basic Information

Item Value
gene id CI01000306_02183898_02186529
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 2183898 ~ 2186776 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_02183898_02186529.mRNA
TGGAGCTTCATGGACGGGCAGGAATGGCTGGATCACGGAGACTTGTTCATTTTTTCACGGCTTTATGCGTGTTTCTGTGCTGCAGCGCTTCGGTGAACGGAGGAAAGAGAGGAAACTCGGATAAATGCAACTACAAGTGTTTGTCTTTTGCCTTTCTTCCTGTTGAGCCGTGTCTGGGTAGTTTGCTGATGACAGACGGGCTATTGACGGACAGATTGCCCCCCAATCTCATTGTCTTACAGGGGCAGAGCTGCTTTTGAAGTCATTTCCCATAGGAAGTCAGTGAACTGTGTGCTCTATTAAAATTCTTTGGCATTTCCTCTTAGGAAGCACAGATCACCTCCCTCCACTGCTACATCAAAGCCGTCCTGTTGAGAGAAACACTTCAGGTGTGAATGAATTGTGTGTTCTTGTGGGCCGTTACAGTTTTTCTTCTGCACTGACAACTGGACTAATGTTGAACCTCTTGCTTTTTATAGACCGCAGGCAATGCGACAGACTTCATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_02183898_02186529.mRNA True 507 mRNA 0.47 2 2183898 2186776

Neighbor

gene id symbol gene type direction distance location
CI01000306_02177474_02180692 HESX1 coding upstream 3058 2177406 ~ 2180840 (+)
CI01000306_02160784_02174325 APPL1 coding upstream 8694 2160784 ~ 2175204 (+)
CI01000306_02156224_02158555 ASB14 coding upstream 25177 2156224 ~ 2158721 (+)
CI01000306_02140523_02142280 RS23, RPS23.L, BRAFLDRAFT_130085, RPS23, RPS23-PS2 coding upstream 41597 2139495 ~ 2142301 (+)
CI01000306_02116775_02121990 ARF4A, ARF5, ARF4 coding upstream 61421 2116372 ~ 2122477 (+)
CI01000306_02204158_02222866 IL17RD coding downstream 17151 2203927 ~ 2222866 (+)
CI01000306_02230144_02236022 ZC3H11A coding downstream 43368 2230144 ~ 2236982 (+)
CI01000306_02238316_02241601 MAF1 coding downstream 51540 2238316 ~ 2242400 (+)
CI01000306_02263738_02279937 NA coding downstream 76842 2263618 ~ 2280012 (+)
CI01000306_02354432_02358965 PNP4A coding downstream 166405 2353181 ~ 2359501 (+)
CI01000306_02112910_02114040 ARF4B non-coding upstream 69796 2112815 ~ 2114420 (+)
G430632 NA non-coding upstream 154606 2003702 ~ 2029292 (+)
G430611 NA non-coding upstream 194149 1935585 ~ 1989749 (+)
G430599 NA non-coding upstream 277254 1905477 ~ 1906644 (+)
G430605 NA non-coding upstream 279551 1903119 ~ 1904347 (+)
G430745 NA non-coding downstream 84001 2270777 ~ 2285286 (+)
G430805 NA non-coding downstream 165935 2352711 ~ 2352939 (+)
G430811 NA non-coding downstream 199508 2386284 ~ 2386558 (+)
G430834 NA non-coding downstream 295330 2482106 ~ 2483041 (+)
G430931 NA non-coding downstream 697115 2883891 ~ 3238771 (+)
G430719 NA other upstream 32944 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 965341 1209395 ~ 1211232 (+)
G430452 NA other upstream 1032960 1150597 ~ 1150938 (+)
G430409 NA other upstream 1183996 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1946529 235447 ~ 242861 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 786380 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 1587368 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 1591276 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 1621457 3807268 ~ 3811243 (+)
G432583 NA other downstream 2139626 4326402 ~ 4327822 (+)

Expression


Co-expression Network