CI01000306_02263738_02279937


Basic Information

Item Value
gene id CI01000306_02263738_02279937
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 2263618 ~ 2280012 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_02263738_02279937.mRNA
CAATAAAAGCGGGCCCGTCTTTAACCATGCCGTAACGATCTGCAATCACTGTGCAACGATGACCAACAGTGGAATGCTCACCTCTCCGCACACTCACGTAAAGTGAGCCAACTCGGATGAATGCAGGAGGGTCAGTCATGTGGTAAACGTAACAAGAGGGAGAAAAAGTGCTTTTTAAGTGATTGCATGGGAGTTGCAGGATGTGAGTCAGGCAAAGAGAGGGAAAGGGAGGGAGGGCGGACATCATTGGAGCTATTGTTGAAAATGTGCAATGGAGGTGGTTGGGGGAAGATGGAAGGATGGCATCAGGGGGAAACAGGTGGGGCGGTATCTGATGGCAAGAAGATGGAGTTTGATGACAAGAAGATGGAGAGACTCAACCCTCATCCACAAGACCTTTTCTGCTTATTAGTGAGCTACTTCCTGACAGGAGCGGTCGGGCTTCAGCAGGATGCAGGATGTGGTGGGGGCCGTGGTGAGGGCAATCTGGGATGCCAGGCAGCAGCACATAATGCTCCTATAAACATAAGGTCATCTGCGTTTGCACGGATTCACCTGCAATCTACAGGCAGCTATCAGGTGGAATTAAACCTGGATTCTCTGAAATTTCAGGTAAGGATAACAAATATACTTGTATATAATGATCTGACATGCAGTTTAATTACTGAGAAAGACTCAAGGGATAATGGATTAAGTAATTGATGTCACTGGAAAGACAACTGATAAGTTCACCTGTAGTTCACTAATGGCTGCACCAATAAGGTGGTAAATGAACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_02263738_02279937.mRNA True 777 mRNA 0.47 5 2263618 2280012

Neighbor

gene id symbol gene type direction distance location
CI01000306_02238316_02241601 MAF1 coding upstream 21218 2238316 ~ 2242400 (+)
CI01000306_02230144_02236022 ZC3H11A coding upstream 26636 2230144 ~ 2236982 (+)
CI01000306_02204158_02222866 IL17RD coding upstream 40752 2203927 ~ 2222866 (+)
CI01000306_02183898_02186529 NA coding upstream 76842 2183898 ~ 2186776 (+)
CI01000306_02177474_02180692 HESX1 coding upstream 82778 2177406 ~ 2180840 (+)
CI01000306_02354432_02358965 PNP4A coding downstream 73169 2353181 ~ 2359501 (+)
CI01000306_02359989_02366944 NA coding downstream 79977 2359989 ~ 2366997 (+)
CI01000306_02369579_02380912 REM1, GEM coding downstream 89567 2369579 ~ 2381322 (+)
CI01000306_02389329_02392416 RBM39, RBM39A, RBM39B coding downstream 109317 2389329 ~ 2392960 (+)
CI01000306_02398383_02404841 NFS1 coding downstream 117855 2397867 ~ 2404903 (+)
G430739 NA non-coding upstream 71237 2159462 ~ 2192381 (+)
CI01000306_02112910_02114040 ARF4B non-coding upstream 149516 2112815 ~ 2114420 (+)
G430632 NA non-coding upstream 234326 2003702 ~ 2029292 (+)
G430611 NA non-coding upstream 273869 1935585 ~ 1989749 (+)
G430599 NA non-coding upstream 356974 1905477 ~ 1906644 (+)
G430805 NA non-coding downstream 72699 2352711 ~ 2352939 (+)
G430811 NA non-coding downstream 106272 2386284 ~ 2386558 (+)
G430834 NA non-coding downstream 202094 2482106 ~ 2483041 (+)
G430931 NA non-coding downstream 603879 2883891 ~ 3238771 (+)
G430690 NA non-coding downstream 756056 3036068 ~ 3054700 (+)
G430719 NA other upstream 112664 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 1045061 1209395 ~ 1211232 (+)
G430452 NA other upstream 1112680 1150597 ~ 1150938 (+)
G430409 NA other upstream 1263716 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 2026249 235447 ~ 242861 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 693144 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 1494132 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 1498040 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 1528221 3807268 ~ 3811243 (+)
G432583 NA other downstream 2046390 4326402 ~ 4327822 (+)

Expression


Co-expression Network