CI01000306_02664578_02669105


Basic Information

Item Value
gene id CI01000306_02664578_02669105
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 2664578 ~ 2669237 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_02664578_02669105.mRNA
TCCACTACAGTAGCAGTGACAGTCGGAGTGGTGCTGGTCTCAACAGCGGGTGTGCTGGGTTATTATTACTTGAACAGGAAAAGGAAACCACAGATTACCCTGATTGATCCCTCTGAAAAATACAAATTGAGACTGGTAGACAAAGAGATTTATTTTAAGAATGTGCACCCAAAGTTCCCCGAAGGGGGAAAGATGTCCCAGTACCTGGAGAGTTTGAGGATCGGAGATGTGATTGACTTCAGAGGACCAGGAGGTTTGCTGGAGTACAAGGGGGAAGGTCTGACAGCATATTTACTATCAATATTTGACCTGAATTTAGATGGATGTATTTACAGTCACACCTTACACCTACATCTCCACCCAACAGGTCGGTTCGCTATACAGGCCGATAAGAAGGCCCCTGCCGAGACCAAGACCGTTAAAACATTGGGTCTTATCTCTGGAGGAACAGGCATTACACCAATGTTGCAGCTGATTCGTGACATCATCAAGAACCCAAGTGACACGACTACATGCAGCCTGCTGTTTGCCAACCAGACTGAGAAGGACATTCTGCTGAAGGATGAGCTGGAGGAGATTCAGGCGAGGCATCCAGATTGCTTCAAACTCTGGTTCACGGTGGACAGAGCTCCTGAAGATTGGGAGTACAGTCAGGGCTTCATCAGTGCTGAGATGATTCAGGAGCACCTGCCTCCACCCAGTGATGACTCTATGATCCTCATGTGCGGTCCACCTCCCATGATCCAGTTTGCCTGTAATCCCAACCTGGACAAACTCGGCTACCGGCAGAGCCAACGCTTTGTCTATTAAACCGTTCTCGACGTTCAAGGCCCAGACCACTAAATACTCCAAAGATACAGACACTGAGTTGCACACAATTGTGTTTAAGCAAATATGACAAATCTGCTCAATTACCCTGTTATGGACAATATATAATACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_02664578_02669105.mRNA True 942 mRNA 0.47 5 2664578 2669237

Neighbor

gene id symbol gene type direction distance location
CI01000306_02654091_02663519 RNPEP coding upstream 884 2654091 ~ 2663694 (+)
CI01000306_02643806_02653170 NA coding upstream 11156 2643806 ~ 2653422 (+)
CI01000306_02626856_02627986 NA coding upstream 36394 2626593 ~ 2628184 (+)
CI01000306_02614704_02617766 NA coding upstream 46493 2614532 ~ 2618085 (+)
CI01000306_02591160_02596388 SYT6 coding upstream 66960 2591160 ~ 2597618 (+)
CI01000306_02672497_02676431 ADR1, ADIPOR1A, ADIPOR1B, ADIPOR1 coding downstream 3260 2672497 ~ 2676907 (+)
CI01000306_02678050_02678704 RABIF coding downstream 8813 2678050 ~ 2679064 (+)
CI01000306_02681470_02697984 KDM5B, KDM5BA coding downstream 12233 2681470 ~ 2697984 (+)
CI01000306_02699041_02741501 IPO9 coding downstream 29487 2698724 ~ 2742267 (+)
CI01000306_02752480_02764107 NA coding downstream 83091 2752328 ~ 2764581 (+)
G430834 NA non-coding upstream 181537 2482106 ~ 2483041 (+)
G430811 NA non-coding upstream 278020 2386284 ~ 2386558 (+)
G430805 NA non-coding upstream 311639 2352711 ~ 2352939 (+)
G430745 NA non-coding upstream 379292 2270777 ~ 2285286 (+)
G430739 NA non-coding upstream 472197 2159462 ~ 2192381 (+)
G430931 NA non-coding downstream 214654 2883891 ~ 3238771 (+)
G430690 NA non-coding downstream 366831 3036068 ~ 3054700 (+)
G430951 NA non-coding downstream 380660 3049897 ~ 3050294 (+)
CI01000306_03048314_03055936 NA non-coding downstream 383775 3048314 ~ 3056098 (+)
G430716 NA non-coding downstream 429407 3098644 ~ 3099359 (+)
G430719 NA other upstream 513624 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 1446021 1209395 ~ 1211232 (+)
G430452 NA other upstream 1513640 1150597 ~ 1150938 (+)
G430409 NA other upstream 1664676 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 2427209 235447 ~ 242861 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 303919 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 1104907 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 1108815 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 1138996 3807268 ~ 3811243 (+)
G432583 NA other downstream 1657165 4326402 ~ 4327822 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003452 cyb5r1 coding NC_007122.7 CM002895.2 24786378 ~ 24799675 (+)