CI01000306_02898289_02901410


Basic Information

Item Value
gene id CI01000306_02898289_02901410
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 2898289 ~ 2901484 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_02898289_02901410.mRNA
CTTTGGGAAATCACATGAACATAGCGGTGGCCTTGTGTAACTTTCCACCCCACAGGTTTGATGAACATACTATATTTTTCGGAGACAGACTGAACATTATATCAGAAGATGATGACATGATGAGGGTTAGGTCTACATCAACAGATACAGAGTTTTTCATTCCTCACACCTACGTTTCCAAAGTGCACAATCGGTGGCTGTTTGAAGGGATCTCCAGGAGAAATGCAGAACAACTTCTTAGGCTGCCTCAAAACTACTCTGGATGTTTTCTAATTCGGGAAAGCCAGTCATGCCCTGGTTCCTACTCACTCTCAATGCGACATGATAGAGACCATATGCACAATGTAAAGCACTACAGAATCCATCAGATCAACAGCGGCTGGTTCTATATCCACAAAAACCGGCCCTTCTCCACTCTCACCCAGCTGGTAGACTATTACTCACGACCTTTTAATGGAACATGCTGTCAGCTGACTGAACCTTGCTTACTTCATGACTTGAGCACAACTGTAGCACACATACCCTCTCCAAAAGAATTCCAGAGGTCCAGTTTTAACTGGAAAGATTTGTCCAGGTCGATGATTCAAAGGCAGTTAAAGGGAGACGAAGAGACTCTGGACAAGATGCGTTACCTTGGGAGTTGCTCAGTTACATAAAGTAAAGTAACAATACAAACAGTAAAGTAACATACTTTAAATATAATTATGTGTGACATAAAATAATTATGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_02898289_02901410.mRNA True 730 mRNA 0.42 7 2898289 2901484

Neighbor

gene id symbol gene type direction distance location
CI01000306_02881627_02896122 NDRG3, NDRG3A, NDRG3B coding upstream 1330 2881627 ~ 2896959 (+)
CI01000306_02835681_02847361 PHF20 coding upstream 49032 2835681 ~ 2849257 (+)
CI01000306_02807061_02829421 NA coding upstream 68868 2807061 ~ 2829421 (+)
CI01000306_02777496_02790606 SULF2A coding upstream 107164 2777402 ~ 2791125 (+)
CI01000306_02752480_02764107 NA coding upstream 133708 2752328 ~ 2764581 (+)
CI01000306_02906259_02914960 TRPC4APA, TRPC4AP coding downstream 4775 2906259 ~ 2916338 (+)
CI01000306_02974291_02976718 TP53INP2 coding downstream 71819 2973156 ~ 2979157 (+)
CI01000306_02983064_02988454 CYLDB coding downstream 81389 2982873 ~ 2988581 (+)
CI01000306_02995035_03002605 TOP1, TOP1L coding downstream 93551 2995035 ~ 3002667 (+)
CI01000306_03018466_03023859 FAM83D coding downstream 116650 3018134 ~ 3024091 (+)
G430834 NA non-coding upstream 415248 2482106 ~ 2483041 (+)
G430811 NA non-coding upstream 511731 2386284 ~ 2386558 (+)
G430805 NA non-coding upstream 545350 2352711 ~ 2352939 (+)
G430745 NA non-coding upstream 613003 2270777 ~ 2285286 (+)
G430739 NA non-coding upstream 705908 2159462 ~ 2192381 (+)
G430690 NA non-coding downstream 134584 3036068 ~ 3054700 (+)
G430951 NA non-coding downstream 148413 3049897 ~ 3050294 (+)
CI01000306_03048314_03055936 NA non-coding downstream 151528 3048314 ~ 3056098 (+)
G430716 NA non-coding downstream 197160 3098644 ~ 3099359 (+)
G430987 NA non-coding downstream 379247 3280731 ~ 3280990 (+)
G430719 NA other upstream 747335 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 1679732 1209395 ~ 1211232 (+)
G430452 NA other upstream 1747351 1150597 ~ 1150938 (+)
G430409 NA other upstream 1898387 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 2660920 235447 ~ 242861 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 872660 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 876568 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 906749 3807268 ~ 3811243 (+)
G432583 NA other downstream 1424918 4326402 ~ 4327822 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003464 ndrg3a coding NC_007122.7 CM002895.2 25064519 ~ 25155003 (+)