CI01000306_03219408_03238461 (GRM7, GRM6B)


Basic Information

Item Value
gene id CI01000306_03219408_03238461
gene name GRM7, GRM6B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 3219408 ~ 3238474 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_03219408_03238461.mRNA
ATGAGAGCTGAAGACTCGGATGTTGGGGACATCTGTCGTGCTTCAAAACACTCCAACTTCAGCTCCAGATGGGCGCACACCGGCAGCAGCATCAGTCGGATCAGCAGGGCGCCCAGACAACACGTGGGCTCCCTGGTTCACGTCATGTGGATAGTGATGATGGGATTTACTCCAGAATCCTGGGCCTCCTCCTCAGGAACTCATTCCATAAAGATTGAGGGTGACATCACTCTGGGAGGGCTTTTTCCGGTGCATTCCAGGGGCCCTGCTGGTGTTCCATGTGGGGAAATTAAGAAGGAGAAGGGGATCCATCGTATGGAGGCCATGTTGTATGCGCTGGACCAGATCAACAGCGACCCAGACCTGCTACCTAACATTACCCTGGGTGCCAGGATACTGGACACATGCTCCAGGGATACGTATGCGCTGGAACAATCCCTCACCTTTGTCCAGGCCCTCATCCAGAAAGACAACTCAGATGTTCGATGTTCCAATGGAGAGCCACCCATCATCCCAAAACCAGAGCGTGTGGTAGGGGTCATCGGGGCTTCGGCCAGCTCAGTGTCCATAATGGTGGCTAACGTTCTTCGGCTGTTTGCGGCATTGGATTTCCATCCGTATTGTGAGGAGCTCTTGCATGGTGTTGCTGCAAGACTGGATTCTGCAGTGCTGCAGATAGGGCCAGTGCTACAGGAAATACCTCAGATCAGTTATGCTTCAACAGCACCTGAACTTAGTGACAACAATCGCTATGACTTTTTCTCCCGAGTCGTGCCGCCAGATTCCTTCCAGGCCCAGGCGATGGTGGACATTGTCAAAGCCATGGGATGGAACTATGTTTCTACTCTGGCATCAGAGGGGAACTATGGAGAGAGTGGTGTAGATGCTTTCATCCAGATATCCAGGGAAGCAGGAGGTCTTTGCATCGCACAGGCCATTAAAATTCCTAGGGAGCCAAGACCAGGAGAGTTTGACAAGATCATCAAAAGGCTAATGGAGACATCCAATGCCAGAGGGGTTATTATCTTCGCTAATGAAGATGACATCAAGCGGGTCCTGGAAGCAGCAAAGAAAGCCAATCTTACAGGTCACTTTTTGTTTGTGGGATCTGATAGCTGGGGAGCAAAAAACTCACCGATCCTGAACCAGGAGGACGTGGCTGAGGGTGCAGTTACCATCCTCCCCAAGCGGGCGTCCATTGATGGAGAAGAACGAATCAGCCGGGATTCGGCATACGAGCAGGAAGGGAAAGTGCAGTTTGTGATTGATGCCGTGTATGCCATGGCCCACGCTCTCCATAGCATGCACATAGACCTTTGTCCAGGTTCAATGGGCGTTTGTGACAAAATGGACCCTGTGGATGGAAGAATGCTGCTGAGCTACATCCGTGCTGTCAATTTTAATGGCAGTGCCGGTACAGGTGTGATGTTTAATGAAAACGGTGACGCCCCAGGACGATACGATATCTTCCAGTACCAGCTTTCCAATACCACCAGCCCGGGATATAAACTCATCGGCCAGTGGACCAACCACTTACGACTTAATGCTGAGGAAATGCAGTGGTCTGGAGGGGATAAAGTGGTTCCAGACTCAGTTTGCAGCTTCCCCTGTGAGTCTGGGGAGAGGAAGAGGATGGTGAAGGGTGTGCCATGCTGCTGGCACTGTGAACTATGTGACGGCTATCAGTACCTACTGGACGAGTTTAACTGTGACATGTGTCCCTTTGACATGAGGCCCACCCCTAACCGCACGGGCTGCCGACCCACTCCCATCATCAAGCTGGAGTGGAGCTCTCCGTGGGCCATTATCCCGGTATTTCTGGCAGTGCTGGGCATTCTTGCTACATCAGGAGTCATCATCACCTTCATCCGCTTCAACGACACCCCCATAGTCCGTGCATCAGGACGAGAGCTCAGCTATGTTCTCCTGACGGGCATCTTCCTCATCTATCTCATCACTTTCCTTATGATCGCCGAGCCAGGCTCCGTGGTGTGCGCGTTCCGCAGGCTGTTTTTGGGGCTGGGCATGAGCATCAGTTACTCTGCCATGCTCACAAAAACTAATCGAATCTACAGGATCTTTGAGCAGGGAAAGAAATCAGTCACGCCACCAAAATTTATCAGCCCCACGTCCCAGCTGATCATCACATTTATACTGATCTCAGTACAGCTCCTGGGTGTTTTCATTTGGTTTGGAGTGGTTCCCCCTCACACGAATGTCGACTTCGATGAGCTACGTCCCCCCAACCCAGAGTATGCCCGTGGGATCCTGAAATGTGATATGTCAGATCTGTCTCTGATTGGCTGTCTGAGCTACAGTATGGTGCTGATGGTCACATGTACAGTCTACGCCATTAAGAGCAGAGGGGTGCCTGAGACATTCAATGAGGCCAAACCCATCGGCTTCACCATGTACACCACCTGTATCATCTGGTTGGCCTTTGTTCCCATATTTTTCGGCACATCACAATCCACAGAAAAGATGTTTATTCAGACCACCACGCTGACCGTGTCCATGAGCTTGAGTGCCACGGTGTCCCTCGGCATGCTGTACATCCCTAAAGTCTATGTCATCATCTTCCACCCAGAGCAGAATGTTCAGAAGCGCAAGCGCAGCTTCAAAGCCGTGGCCCAGGCAGCCACTGTTTCCACTCATCTCTCACAGAAATCCAACGACAAGCAGAACGGAGAGACCAAAGCTGAACCAGATAGATCCCAATAAAGACCAGAAGGTA

Function

symbol description
grm6b Predicted to enable group III metabotropic glutamate receptor activity. Acts upstream of or within detection of light stimulus involved in visual perception. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in forebrain; pharynx; and retina. Human ortholog(s) of this gene implicated in congenital stationary night blindness 1B. Orthologous to human GRM6 (glutamate metabotropic receptor 6).
grm7 Enables several functions, including adenylate cyclase inhibitor activity; amino acid binding activity; and group III metabotropic glutamate receptor activity. Involved in several processes, including adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway; axon development; and sensory perception of sound. Located in cell cortex; dendrite; and plasma membrane. Is integral component of membrane. Part of receptor complex.

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04608 GRM6; metabotropic glutamate receptor 6

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_03219408_03238461.mRNA True 2734 mRNA 0.51 11 3219408 3238474

Neighbor

gene id symbol gene type direction distance location
CI01000306_03214469_03216852 COMTB coding upstream 2528 3214469 ~ 3216880 (+)
CI01000306_03196205_03203310 CCDC120 coding upstream 15246 3196205 ~ 3204162 (+)
CI01000306_03172031_03180084 NA coding upstream 38520 3171760 ~ 3180888 (+)
CI01000306_03163659_03168243 CXXC1B coding upstream 51070 3163273 ~ 3168338 (+)
CI01000306_03141095_03149372 TFE3B coding upstream 69974 3141095 ~ 3149434 (+)
CI01000306_03244498_03247567 OTUD5B, OTUD5, OTUD5A coding downstream 4422 3242896 ~ 3247828 (+)
CI01000306_03248839_03256675 MON1BB, MON1B coding downstream 10365 3248839 ~ 3257063 (+)
CI01000306_03270390_03277409 NA coding downstream 31916 3270390 ~ 3277556 (+)
CI01000306_03612105_03612431 NA coding downstream 373331 3611805 ~ 3612761 (+)
CI01000306_03642939_03646831 PPCS coding downstream 404465 3642939 ~ 3647153 (+)
G430716 NA non-coding upstream 120049 3098644 ~ 3099359 (+)
CI01000306_03048314_03055936 NA non-coding upstream 163338 3048314 ~ 3056098 (+)
G430690 NA non-coding upstream 164708 3036068 ~ 3054700 (+)
G430951 NA non-coding upstream 169114 3049897 ~ 3050294 (+)
G430834 NA non-coding upstream 736367 2482106 ~ 2483041 (+)
G430987 NA non-coding downstream 42257 3280731 ~ 3280990 (+)
G431039 NA non-coding downstream 121303 3359777 ~ 3370252 (+)
G431107 NA non-coding downstream 249049 3487523 ~ 3488001 (+)
G431125 NA non-coding downstream 279580 3518054 ~ 3518312 (+)
G431129 NA non-coding downstream 293420 3531894 ~ 3532107 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 240251 2973156 ~ 2979157 (+)
G430719 NA other upstream 1068454 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 2000851 1209395 ~ 1211232 (+)
G430452 NA other upstream 2068470 1150597 ~ 1150938 (+)
G430409 NA other upstream 2219506 925544 ~ 999902 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 535670 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 539578 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 569759 3807268 ~ 3811243 (+)
G432583 NA other downstream 1087928 4326402 ~ 4327822 (+)
G432678 NA other downstream 1283708 4522182 ~ 4522536 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003483 grm6b coding NC_007122.7 CM002895.2 25634041 ~ 25679721 (+)