CI01000306_03248839_03256675 (MON1BB, MON1B)


Basic Information

Item Value
gene id CI01000306_03248839_03256675
gene name MON1BB, MON1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 3248839 ~ 3257063 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_03248839_03256675.mRNA
ATGGATCCGAGCAGTCAACAGAGTGGGAATATGGAGGAGGTGAAGATATTTGATCCATCCATTCTTCCACAATGTCTTGATCAGATAGATATTGCTTATTCGGACAGTGATGTCCCATCAGAAAACCATTGTGTGAATGAAGATCACAGGGTGCCTTCAGACCCAGAGGGGCTCTTGGAGTCAGCAGACCCTACATCAGAGGAGGGCAACCAATCACAAGAGCCTTCAACAGATATGCAGAAGCTCCACATTGACGATGACAGGTCTCTGTGTGCCGGTGGTTCCGAGACTGATTCTGGGAAAGCATCCGAGGACTCTGCATTAGTTGACAATGGCAATGATGACTCGGGTGAGTTTGTTGTAACCGTGTTAGCCCGGGGGAAGTTGGAAGAGCAGGGAATGGGTATGAAAGGAGCCTCGTCTCCTCTATCCGAGACCGGTACACCACTGGGACCCCCCTCGCACAGGAATGAGGATGTGATGGCGGAGAGTTGGAGACAGCACAGGAAGCATGTGTTTGTGTTGAGCGAGGCTGGGAAGCCCATTTATTCCCGATATGGAAGTGAGGAGGCTCTGTCCTCCACTATGGGAGTGATGATGGCGTTGGTGTCCTTTGTTCAAAGTGGAGACAACATAATTCGTTCAGTCTACTCTGATGAGCACACGGTTGTGTTCATGCAGCGGGGTCCTCTGGTGCTGGTGTCCGTCTCCAACAGCCGTCAATCGGAGCAGCAGCTCCGTAACGAGCTGCTCTACGTCTACAACCAGATCGTCAGCATGCTCACTCAGGCCAGCATCACCCGCATCTTTGAGCACAAGAAAAACTATGACCTGCGACGTCTGCTGGCTGGCTCGGAGAAGATTCTCGACGGCCTCCTTAACCTCTTGGACTCAGACCCCAGCCTCTTACTCTCCGCTGTGCACTGTCTCCCCTTGGCCTCGTCTCTCAGGGACTCCCTCAGTCAGATTCTCCAGAAGGCAATCACGCCCAACCTGGTCTTCTCCATCCTCATAGCCAAGAACCAGTTGCTCACCATAGTGCAAGAAAAGATGGTCATCGACGATGCCCGACTGGAGCCTGCTGACCTCCACCTTCTGCTGAACCTCATCGGGGCTTCGTCCGCCTTTCAGGCTGGGGAGATCTGGACACCCATCTGCCTGCCCAGTTTTAATCCTGACTGTTACTTTTATGCATACATCTCCTATCTGGACCCTCCTGAATGTACTGTTTGTTTGGTTCTTCTCTCCACCGATAAAGAGGCGTTTTATTCGGTGGCCGAGTGTAAGAGGAAGATCGAGGAGGCTATGCAAACGCAGAATGCGCTGAACTCCATAGCAAAAGCTCACTCGTACAGCGTCAGTCAGGTGGGAGTGTCTGACCTCAGGCATTTCATGTACAAGCCCTTTGATGTGCCAGACAACTATCGGCAGCTAACGCAGTTCACCAGCCCAGAGATGGAGGCCCCTTACGGCAGTGAGGAGGAGCAGATGAGACTCCTGGACCTGTACAGAGACATGCACGGCCGTATTCACAGCACCTCACGCCCCCTCAAGCTCATCTACCACGTGGCCGAACGTGAGACTCTGCTGGCCTGGGTCACGAGTAAATTCGAGTTGTACACGTGCTTCAGCCCCCTTGTCACAAAAACCTGTGCCATCAACGCCATCACCAAGCTGCTGCGCTGGATCAAGAAGGAGGAAGACCGTCTGTTTATCCGATACCCTCAGAAATACTCCACAACCCCCAACCCCAGTAAGAGCTCTAAAGGAGAAGTTCTCTTTGACCTTTTGTCTTATATGGTTTTGTGTTGGAAACCGAAAGACCAAACCTCGCTCCATTTTAATTAAAGAAAATGAGCTGAAACATATCAGAAGATCAAAAAAAAAAATCTGTCTTTACTATGGGATTAATGTTCTTTCATTTCTGTTTTCAGTTAGGTTACTGCACAGCATGTGTAGTTTACTGTTGTATATGATTTTTTTTTTGTTTCCTGTTAAATAATTTGCCAGTCAGGAATTGTGACATTTACTCTTCTGGCATGTGCCCTATGACGTCATCAAAATCATAAGATCAAGATCACCATAATATGTAGGTTTAAACCACTGGACATAATAGGAAAAAATGCTCAATGTATGATATTTGGAGAATAATATTGCACTTGCAAATTTCTCAAGTTTGTTTTTCTGGAAAAAAAAAAACATTTTTATTCAAGAGGAATAATATATTGGTGCTGTA

Function

symbol description
mon1bb Predicted to act upstream of or within protein targeting to vacuole and vesicle-mediated transport. Orthologous to human MON1B (MON1 homolog B, secretory trafficking associated).
mon1b Involved in early viral transcription and late viral transcription. Located in cytoplasm. Part of Mon1-Ccz1 complex.

GO:

id name namespace
GO:0012505 endomembrane system cellular_component

KEGG:

id description
K20195 MON1; vacuolar fusion protein MON1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_03248839_03256675.mRNA True 2236 mRNA 0.48 6 3248839 3257063

Neighbor

gene id symbol gene type direction distance location
CI01000306_03244498_03247567 OTUD5B, OTUD5, OTUD5A coding upstream 1011 3242896 ~ 3247828 (+)
CI01000306_03219408_03238461 GRM7, GRM6B coding upstream 10365 3219408 ~ 3238474 (+)
CI01000306_03214469_03216852 COMTB coding upstream 31959 3214469 ~ 3216880 (+)
CI01000306_03196205_03203310 CCDC120 coding upstream 44677 3196205 ~ 3204162 (+)
CI01000306_03172031_03180084 NA coding upstream 67951 3171760 ~ 3180888 (+)
CI01000306_03270390_03277409 NA coding downstream 13327 3270390 ~ 3277556 (+)
CI01000306_03612105_03612431 NA coding downstream 354742 3611805 ~ 3612761 (+)
CI01000306_03642939_03646831 PPCS coding downstream 385876 3642939 ~ 3647153 (+)
CI01000306_03658929_03661523 RBM12 coding downstream 401577 3658640 ~ 3662015 (+)
CI01000306_03666143_03671601 NA coding downstream 409080 3666143 ~ 3672675 (+)
G430931 NA non-coding upstream 10068 2883891 ~ 3238771 (+)
G430716 NA non-coding upstream 149480 3098644 ~ 3099359 (+)
CI01000306_03048314_03055936 NA non-coding upstream 192769 3048314 ~ 3056098 (+)
G430690 NA non-coding upstream 194139 3036068 ~ 3054700 (+)
G430951 NA non-coding upstream 198545 3049897 ~ 3050294 (+)
G430987 NA non-coding downstream 23668 3280731 ~ 3280990 (+)
G431039 NA non-coding downstream 102714 3359777 ~ 3370252 (+)
G431107 NA non-coding downstream 230460 3487523 ~ 3488001 (+)
G431125 NA non-coding downstream 260991 3518054 ~ 3518312 (+)
G431129 NA non-coding downstream 274831 3531894 ~ 3532107 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 269682 2973156 ~ 2979157 (+)
G430719 NA other upstream 1097885 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 2030282 1209395 ~ 1211232 (+)
G430452 NA other upstream 2097901 1150597 ~ 1150938 (+)
G430409 NA other upstream 2248937 925544 ~ 999902 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 517081 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 520989 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 551170 3807268 ~ 3811243 (+)
G432583 NA other downstream 1069339 4326402 ~ 4327822 (+)
G432678 NA other downstream 1265119 4522182 ~ 4522536 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003485 mon1bb coding NC_007122.7 CM002895.2 25693395 ~ 25709311 (+)
bowfin (Amia calva) AMCG00009626 mon1b coding CM030126.1 CM030126.1 42960967 ~ 42972378 (+)