CI01000306_03612105_03612431


Basic Information

Item Value
gene id CI01000306_03612105_03612431
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 3611805 ~ 3612761 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_03612105_03612431.mRNA
TCATAAAAGGGAAAACAGGGAGGGGTGGGAAACACGCTCACCTGCCCCAGAGTAAAAAGGAGATTCCTCATTTTTTCCAGTGCCCCAGGTGCTGATCTCGAGTTATTTTTGAAAACAAGAATAACTAAAATAGCAACGGCTCATTGTTGTGCCTGAATGTTGAGTGCTGTAATTGTTCACTGCGGCCGGCTCGAAGACTCATCTTCATTAAATGGAAAAGTAGGTAACAGCAACAGCTTTTAAATGTCAGTCTTCCCTCTCCATTAAAGGCTTAATGGTTGCATTGAAACCACCCCCAGGATGAGAACATTAATAACCCAGTCGTTACTCGCATTTTTAGGATGTGTCAATTATGGCTCCGTAGCGCACACTGCCAGCCGAGCGCATTGTTCGGCTTATTACAGCCTGCAGCAGATCAGGGCTTGTCACAGTGAGACCGCCGCTCATCCTGGCCTATCGGATGCCAGCGCTGATCTCAGGCCTGCCAGAGATGCTCCTTTAAGGCAGCGTGCACAGAATGGGAGATCTGAGGTGTCGGAGGAGCCCTGTTCCAATAACGAGGTCTGGCAGATACACATTGGCTGGGGTGCTGTGTCCTTAGAGCGCCAGTCTCATTGCTTTACATGAGGGCAGATTCCCAACTCCCCGGCTCAGCAGTCTACAGGGGCCGCATGCATGTACTCCATAATTAATCTGCCAGTCACAGCAAAGTGCCACTCTGGCTGGAGAGAAATGGAGAGCTGCGCACATCCGAGCAGCTGATAATCATAAATGTGGCACCGTGTTAATGGTAGGTTAACGTAAAAGCTGCAGGATTTTAAAAAGCCCTGAGGGCCAGGAATGCAGCTAAGACAAATGGACACTGAATTCGCATAAGTATTTCAGCCTGATGTGCTCGTACGCAGAGAATGTGTCAACTGAAAAATGTCATTTGCCAAACTGTAAAAACATTCACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_03612105_03612431.mRNA True 957 mRNA 0.48 1 3611805 3612761

Neighbor

gene id symbol gene type direction distance location
CI01000306_03270390_03277409 NA coding upstream 334249 3270390 ~ 3277556 (+)
CI01000306_03248839_03256675 MON1BB, MON1B coding upstream 354742 3248839 ~ 3257063 (+)
CI01000306_03244498_03247567 OTUD5B, OTUD5, OTUD5A coding upstream 363977 3242896 ~ 3247828 (+)
CI01000306_03219408_03238461 GRM7, GRM6B coding upstream 373331 3219408 ~ 3238474 (+)
CI01000306_03214469_03216852 COMTB coding upstream 394925 3214469 ~ 3216880 (+)
CI01000306_03642939_03646831 PPCS coding downstream 30178 3642939 ~ 3647153 (+)
CI01000306_03658929_03661523 RBM12 coding downstream 45879 3658640 ~ 3662015 (+)
CI01000306_03666143_03671601 NA coding downstream 53382 3666143 ~ 3672675 (+)
CI01000306_03677906_03697637 NA coding downstream 65145 3677906 ~ 3697792 (+)
CI01000306_03704267_03746574 UNM_SA1614 coding downstream 91506 3704267 ~ 3746921 (+)
G431134 NA non-coding upstream 15436 3538785 ~ 3596369 (+)
G431130 NA non-coding upstream 74350 3532604 ~ 3537455 (+)
G431129 NA non-coding upstream 79698 3531894 ~ 3532107 (+)
G431125 NA non-coding upstream 93493 3518054 ~ 3518312 (+)
G431107 NA non-coding upstream 123804 3487523 ~ 3488001 (+)
G431226 NA non-coding downstream 154401 3767162 ~ 3767393 (+)
G431228 NA non-coding downstream 157236 3769997 ~ 3770246 (+)
G431231 NA non-coding downstream 158397 3771158 ~ 3771396 (+)
G431243 NA non-coding downstream 176218 3788979 ~ 3789321 (+)
G431242 NA non-coding downstream 178015 3790776 ~ 3791987 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 632648 2973156 ~ 2979157 (+)
G430719 NA other upstream 1460851 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 2393248 1209395 ~ 1211232 (+)
G430452 NA other upstream 2460867 1150597 ~ 1150938 (+)
G430409 NA other upstream 2611903 925544 ~ 999902 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 161383 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 165291 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 195472 3807268 ~ 3811243 (+)
G432583 NA other downstream 713641 4326402 ~ 4327822 (+)
G432678 NA other downstream 909421 4522182 ~ 4522536 (+)

Expression


Co-expression Network