CI01000306_03772689_03777211 (DYNLRB1)


Basic Information

Item Value
gene id CI01000306_03772689_03777211
gene name DYNLRB1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 3772689 ~ 3777550 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_03772689_03777211.mRNA
ATGGCTCTGCTCCCAGATATCTACATTTTACAACGTGAAAGCGTCACTAATGAGTCTCTGTTTCATGCAAAATTCTTGACTAATAAAAAGGCTGAGGTGGAGGAGACGATGAAAAGGCTCCAGAACCAGAAAGGAGTACAAGGAATTATCATTGTTAATGCAGAAGTTTTCCCCATGTGCTCTCTTTTAATAGGCATCCCCATTAAAAGCACCCTTGACAACGCAAGCACAGTTCAGTATGCTGCTAATATACACCAGTTGCTCATGAAAGCTCGGGGAATAGTGAGGGACATCGACCCTCAGAATGATCTGACCTTTCTTAGAGTTCGATCAAAGAAGAATGAGATCATGATTGCCCCAGACAAGGACTATTTCCTGATCGTCATTCAAAATCCTACAGAGTAGTCCTGAATTCTTCATAGTAGAATTGCCATAGTATTTTTTTTCTAAATAATGGCCAAAAGTGTTTCATTTCATATGTTCCAGTAAAGTGAAGTTTATGTAGTAGCACAGTTACATTTAAAGGAAGTTGCTTCCATCTTATTATAAATGTTAAGTTTGTATTAATCTTGCTTACCATTCCGATAATTTGCCTTTTTTCTGTAATTTATTGTTCTCTCATATTCTCTTTTGCAAGTACTCCAGCTTTTCATCATCTATATGCATCAACATGACACTATAACATACTGTACTTGTTTGTGTATGCTAAAAAGGACA

Function

symbol description
dynlrb1 Enables dynein intermediate chain binding activity. Acts upstream of or within transforming growth factor beta receptor signaling pathway. Part of dynein complex. Is expressed in ovarian follicle. Orthologous to human DYNLRB1 (dynein light chain roadblock-type 1).

GO:

id name namespace
GO:0030286 dynein complex cellular_component

KEGG:

id description
K10419 DYNLRB, DNCL2; dynein light chain roadblock-type

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_03772689_03777211.mRNA False 717 mRNA 0.37 4 3772689 3777523

Neighbor

gene id symbol gene type direction distance location
CI01000306_03704267_03746574 UNM_SA1614 coding upstream 25768 3704267 ~ 3746921 (+)
CI01000306_03677906_03697637 NA coding upstream 74897 3677906 ~ 3697792 (+)
CI01000306_03666143_03671601 NA coding upstream 100014 3666143 ~ 3672675 (+)
CI01000306_03658929_03661523 RBM12 coding upstream 110674 3658640 ~ 3662015 (+)
CI01000306_03642939_03646831 PPCS coding upstream 125536 3642939 ~ 3647153 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L coding downstream 552 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA coding downstream 29745 3807268 ~ 3811243 (+)
CI01000306_03827847_03828735 NA coding downstream 48214 3825737 ~ 3828845 (+)
CI01000306_03889176_03889334 NA coding downstream 110825 3888348 ~ 3889371 (+)
CI01000306_04050451_04054257 NA coding downstream 272809 4050332 ~ 4054402 (+)
G431231 NA non-coding upstream 1293 3771158 ~ 3771396 (+)
G431228 NA non-coding upstream 2443 3769997 ~ 3770246 (+)
G431226 NA non-coding upstream 5296 3767162 ~ 3767393 (+)
G431134 NA non-coding upstream 176320 3538785 ~ 3596369 (+)
G431130 NA non-coding upstream 235234 3532604 ~ 3537455 (+)
G431243 NA non-coding downstream 11456 3788979 ~ 3789321 (+)
G431242 NA non-coding downstream 13253 3790776 ~ 3791987 (+)
G431249 NA non-coding downstream 20148 3797671 ~ 3797894 (+)
G431251 NA non-coding downstream 22693 3800216 ~ 3800611 (+)
G431252 NA non-coding downstream 23111 3800634 ~ 3800857 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 793532 2973156 ~ 2979157 (+)
G430719 NA other upstream 1621735 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 2554132 1209395 ~ 1211232 (+)
G430452 NA other upstream 2621751 1150597 ~ 1150938 (+)
G430409 NA other upstream 2772787 925544 ~ 999902 (+)
G432583 NA other downstream 548879 4326402 ~ 4327822 (+)
G432678 NA other downstream 744659 4522182 ~ 4522536 (+)
G432958 NA other downstream 1881405 5658928 ~ 5660169 (+)

Expression


Co-expression Network