CI01000306_04454619_04454783


Basic Information

Item Value
gene id CI01000306_04454619_04454783
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 4454619 ~ 4455552 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_04454619_04454783.mRNA
ATGGCCGTCTCCGGGTTTGTTTGCTCCGCTTTGCGTTGTAACATCACATTAACGAGTCGCATTATAGGAATTTCTCATAAAGATGGGAGACTTCGCTCAACATGGCGTTGTTGCGGCTGCTTCCAGCAGTCCGGCTGGAAGAACGGCTCGATAAACGTCGGGTAAATTCGGAAATGCTCGGGTTCACCTTACGCCACACCGTAGCGATTGGAAGAACGACTCATTTTCGCGAATCGGTTCATTTGAACAGTTCGTTTCAAAGACGCCGTTCATAAAACGATTCAGGGATTATTTTTTACGTCGTGACGCAATTACGTCTTCACGCCTCCTGACAACGTTTGTTACCAACTGGAACTTTTTATGTAGGCCTATTTTTTCCCATTTACTTTAAACAAGACTAGACTTCAGTACATATCTTGAATGAAAAAAAAACAAAACAGTTCATTCATATTGTGTGTGTGTGTGTGTGTGTTGATAAAACTGTAAAACAATCAAGTCATAAACATACTTACAGTACATTTGTAATATTTCAGCTAGTCGGCTACTAAATTAACTTTTTGCCACATCAGTCAAATTCGAAATAGGTTGTTGGTTCAATTAGTTGGTCAGTTGTTGACTCCACAACCGCTCGAAACGATTCAGTTCAATTTGTGAACGACTCGTTCAGGCAAAATCTAAAAAGAACGATTCGTTTGCGAATCGGACATTGCAATACGCCAATGAGAGTGACGTCATAAAGGCAGTCGCCACTCGCCTGCACTGTTTAAAAAAGCTAGTTTATTGCAACTTTCTCTTTAACAGTCATTGTCAACTTTTTTTTTTTTCTTTTCTCTTCTCTTCCATATGTTCAGATGGCATTGGATGTATTGTTGATACATTCTGTGTAATGTATGCAAAGTTGTATTTCATTAATGTCATCTCTGAATTGTTTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_04454619_04454783.mRNA True 934 mRNA 0.39 1 4454619 4455552

Neighbor

gene id symbol gene type direction distance location
CI01000306_04253810_04255748 BARX1 coding upstream 197778 4253163 ~ 4256841 (+)
CI01000306_04111278_04162816 FBLN2 coding upstream 290775 4110793 ~ 4163844 (+)
CI01000306_04077126_04078242 NA coding upstream 376088 4077126 ~ 4078531 (+)
CI01000306_04050451_04054257 NA coding upstream 400217 4050332 ~ 4054402 (+)
CI01000306_03889176_03889334 NA coding upstream 565248 3888348 ~ 3889371 (+)
CI01000306_04489350_04503649 ALPL coding downstream 33798 4489350 ~ 4505749 (+)
CI01000306_04570147_04574537 NMUR3 coding downstream 114231 4569783 ~ 4574728 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding downstream 230569 4686121 ~ 4753101 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding downstream 332618 4788170 ~ 4794154 (+)
CI01000306_04859604_04861501 NA coding downstream 403986 4859538 ~ 4861570 (+)
G432586 NA non-coding upstream 34990 4418192 ~ 4419629 (+)
G432568 NA non-coding upstream 92388 4360581 ~ 4362231 (+)
G432571 NA non-coding upstream 106748 4345029 ~ 4347871 (+)
G432629 NA non-coding upstream 146926 4307346 ~ 4307693 (+)
G432628 NA non-coding upstream 147279 4307121 ~ 4307340 (+)
G432556 NA non-coding downstream 583 4456135 ~ 4506862 (+)
G432672 NA non-coding downstream 53887 4509439 ~ 4509709 (+)
G432680 NA non-coding downstream 74765 4530317 ~ 4530526 (+)
G432697 NA non-coding downstream 112058 4567610 ~ 4567836 (+)
G432703 NA non-coding downstream 125045 4580597 ~ 4586360 (+)
G432583 NA other upstream 126797 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 645621 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 671600 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 677069 3772689 ~ 3777550 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 1475462 2973156 ~ 2979157 (+)
G432678 NA other downstream 66630 4522182 ~ 4522536 (+)
G432958 NA other downstream 1203376 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 1524961 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 1650591 6106143 ~ 6108175 (+)
G433724 NA other downstream 1653059 6108611 ~ 6129778 (+)

Expression


Co-expression Network