CI01000306_04570147_04574537 (NMUR3)


Basic Information

Item Value
gene id CI01000306_04570147_04574537
gene name NMUR3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 4569783 ~ 4574728 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_04570147_04574537.mRNA
ATATAAATATAGTATCCTATACGCTGTTGCTATGAAGCAATGTAAATAATGTATTAAACTATACAGTTACATTTAATGGAAAAAAATGTTCATGGAAAAGCTAACATCCTTGTTCGGGATTATTCAAATAAGTTTGGAATTGAGGAAATAACAATAATTATAATAATAAAAAAAGTATTTCTGTAGAACATACTGCTTGCTACCTCAACCTATATATTTCTAGTCTGCATTTATTGTGCAAATCTGTTTGACACAGGTCTCTATCAATCACGCTGAAGGTGCAATCTAAGAGGTAGCAGTTTATGTTGACTTCAAGAAGGGCTCATTTAACCTCATTTAATCATTTCACCCTTAGATTCCCATGATGGCTCTGACCTGCCTTTGCGAGTCTATGAATGGATCAGACCAGCCTTATGTGTTCTGCAACAGCTCTACATTCAACTTTACCGGCGATGAGAGTGGGCGCTGTTACCTTCAGACCGTGGATGAAGTTCTGTTTAGTCTTCTAGGCCCTAGACGATCTCCTTTCTTCTTCCCCGTAACCATTACGTACATCCTCATCTTCATCACAGGGGTCTTGGGAAACCTCCTCACTTGCACTGTGATCACTAAAGACAGGAAGATGCGAACACCCAGCAACCTATATCTCTTTAGCCTGGCCATCTCAGACCTGCTGGTGCTGCTCTTTGGGATGCCGCTGGAAATCTACGAGCTGTGGCAGAACTACCCTTTCCCCTTTGGTGAAGGCATCTGCTGCTTCAAGATCTTCTTATTTGAGACGGTTTGTTTTGCTTCTGTGCTCAACGTTACAGTGCTGAGCGTGGAGCGCTACATAGCTGTTATTCACCCGCTCAAAACCCGTTACGCCATAACCAACAAGCACGCTCAAAGGGTCATCGCCAGTGTTTGGGCTCTGTCCCTGCTCTGTGCCATCCCAAACACTTTACTTCACGGCCTGCAGTACCAGTACCTGCCAGAGAGGGTTCTGGAGTCAGCTACCTGCAACCTGCTCAAGCCCAAATGGATGTACAACTTGGTGATCCAGGTCACCACTGTGCTCTTTTACTTTGTCCCCATGATGATGATCAGTGTGCTGTATCTGATGATTGGTCTGACACTGGGCAGGGGACAGAAGCAGAGAAAGGACAAGCAGGGCAACCACAGCAATGGCAGCTGGAAAATCCATCTGGACAGTAGACGGAAAAGGCAGGTCATCAAGATGCACTTTGTGGTAGTATTAGTGTTTGCCATCTGCTGGGCTCCATTCCACATCGACCGACTCTTGTGGAGCTTCATCACGGGTTGGACGGATCACATGCATAAAATTTTCGAATATGTGCACATAATCTCGGGTGTGCTTTTCTACCTCAGCTCCGCCGTTAACCCCATCATCTACAACCTACTCTCCAGCCGTTTCCGTGAACGGTTTCAAGTGCTGATGTGCAGTCACCTGTCGACAAACTCTTCTCGTAATGACTCCACACCTTTCTATGTATTTCCCAAAGACCCCCCTACTGATCTCCAAGAGCAGGAGCGTGGGCGGCCCACTTCCTTTTGTCATTATCACCAGCAGTTGGGGACGGGGGAATGAATGCTTTCATCTGAGAAAACATGCTCTGTGATCTCATATAGGCATCTTTGGTACCCCTCACTAAAAACAGAAATATATAATGATGTGAAACATGTCAATTACAATACTGTAAATAATAAGCAATTCCTTAAAACCACATGTAAATGGATATACTGGTTTGGACTGATATGGACTAAAAGTGAAAAATCTGA

Function

symbol description
nmur3 Predicted to enable neuromedin U receptor activity. Acts upstream of or within circadian behavior. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in brainstem; forebrain; and hypothalamus.

NR:

description
neuromedin U receptor 1a, partial

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_04570147_04574537.mRNA True 1782 mRNA 0.44 2 4569783 4574728

Neighbor

gene id symbol gene type direction distance location
CI01000306_04489350_04503649 ALPL coding upstream 64034 4489350 ~ 4505749 (+)
CI01000306_04454619_04454783 NA coding upstream 114231 4454619 ~ 4455552 (+)
CI01000306_04253810_04255748 BARX1 coding upstream 312942 4253163 ~ 4256841 (+)
CI01000306_04111278_04162816 FBLN2 coding upstream 405939 4110793 ~ 4163844 (+)
CI01000306_04077126_04078242 NA coding upstream 491252 4077126 ~ 4078531 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding downstream 111393 4686121 ~ 4753101 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding downstream 213442 4788170 ~ 4794154 (+)
CI01000306_04859604_04861501 NA coding downstream 284810 4859538 ~ 4861570 (+)
CI01000306_04863197_04868703 NA coding downstream 288469 4863197 ~ 4868794 (+)
CI01000306_04958429_04977273 NA coding downstream 383613 4958341 ~ 4977418 (+)
G432697 NA non-coding upstream 1947 4567610 ~ 4567836 (+)
G432680 NA non-coding upstream 39257 4530317 ~ 4530526 (+)
G432672 NA non-coding upstream 60074 4509439 ~ 4509709 (+)
G432556 NA non-coding upstream 62921 4456135 ~ 4506862 (+)
G432586 NA non-coding upstream 150154 4418192 ~ 4419629 (+)
G432703 NA non-coding downstream 5869 4580597 ~ 4586360 (+)
G432745 NA non-coding downstream 247422 4822150 ~ 4822382 (+)
G432768 NA non-coding downstream 287600 4862328 ~ 4862623 (+)
G432795 NA non-coding downstream 369804 4944532 ~ 4944764 (+)
G432907 NA non-coding downstream 638063 5212791 ~ 5213089 (+)
G432678 NA other upstream 47247 4522182 ~ 4522536 (+)
G432583 NA other upstream 241961 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 760785 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 786764 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 792233 3772689 ~ 3777550 (+)
G432958 NA other downstream 1084200 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 1405785 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 1531415 6106143 ~ 6108175 (+)
G433724 NA other downstream 1533883 6108611 ~ 6129778 (+)
G434545 NA other downstream 2544589 7119317 ~ 7119859 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003509 nmur3 coding NC_007122.7 CM002895.2 28107632 ~ 28126139 (+)