CI01000306_04859604_04861501


Basic Information

Item Value
gene id CI01000306_04859604_04861501
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 4859538 ~ 4861570 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_04859604_04861501.mRNA
CTATAAGTGGGAGGGAACATGTATTTTGAACACTTGTTGCTTTGCATGCAGCACATTCAAACAGCCATGTGCACTGCAACCGCAATTCTGCTCATTGTGTTGGCAGCTTTCTTTGCTGTTTTTTGTTTGTTGGTAGTTGTCCCGGTATACTTTGAGCTGAGAAATTTAAATATTCCTCCTGGAGTTGCTAATCCTGGGAAACTACGTGGGATTCATTGTGCGTATGTTGGGATAAACATTGTGATAAATTTTACACGATGGTTCAGATGTTGTATCATGGCCAGCAAAGGGCCAGTGCCCCAAGGGCTTCGTATTAAGGACTTGACCTTCAGTGGAGTTCCAGTGAGGGTGTATGAGCCTACAGCTGCCTCAGGAGAGAAAAAAAGAGGCCTGGTGTACTTTCATGGTGGCGGATGGATGTTTGGCTGCATTGGTAATGCTGTATATGTACGTGTAGACACAGTAAAATACTGTTGTGTTGATATTTTAACAAGTTTTGATTGTCCTTCCACAGATGATTACGATGAAGTGTGTCAGTATATATCACTGGAGAGTGACACTACAGTTGTCTCTGTTGGTTACCGTCTGGCCCCCGAGCACAGGTACCCTGCCCACTTGGATGACTGTGAGGTCGTGACTCGCCACTTCCTATCAATAGCGGCAACCGATTTCGGGGTGGACCCACACAGGGTGGCAGTTGGTGGGGACAGTGCAGGGGCGAACCTGGCAGCCGCTCTCTGCCAGAGGCTGTCGAAGACGCAGGATGGTCATCTGCCATCTCCCTGTGCCCAGGTTCTCATCTACCCGGCTCTGCAGATGGCAGATTTCCACCTGCCCTCATACCAGCAGAACCACTCTGTGCCCATATTGTTCAGAGGCCGAACGGTGTTCTTTTTCCTGCAGTACCTCAACGGGAATACGTCTGTGAGCCAGCAGGTTCTGGAAGGCAAGCATGTTCCTGCCGAGCTAAAACTTCGCTATAAGAAATGGCTGGATCCAGATAATCTTCCACCTCAGTTTAGAAAGGGAGCAAGAAGTCCGCAGGTTATTGCAAGCCATGATGCTGACGTCTATCACATCATCAAACAGGGCTTAGATCCAGAGATCTCCCCTTTACTAGCCGAGGACGATGTTCTTCGTCTCACGCCAGCCGCCTTCATCCTGACTTGTGAGTTTGATGTTCTGAGAGATGATGGCATTCTGTTCCAGAAGCGACTGAAGGATGTAGGAGTGGATGTCACGTGGGACCATCTATCTGATGGCTTCCACGGGATCATCAGCTTCTTCAACCAAGGCTGGTTGACGTTTCAATCATCTCGAAGGGGTATGGACAGTATTGTAAGATATGTGAAGACTCTCTGACTGGGAAGTCAAAAGATTTGTCAGAATGATTCAGAATATGGCTTACATGAGGTTTTTTGTGGCAAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_04859604_04861501.mRNA True 1431 mRNA 0.48 3 4859538 4861570

Neighbor

gene id symbol gene type direction distance location
CI01000306_04789240_04793134 LRRC38, LRRC38A coding upstream 65384 4788170 ~ 4794154 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding upstream 106437 4686121 ~ 4753101 (+)
CI01000306_04570147_04574537 NMUR3 coding upstream 284810 4569783 ~ 4574728 (+)
CI01000306_04489350_04503649 ALPL coding upstream 353789 4489350 ~ 4505749 (+)
CI01000306_04454619_04454783 NA coding upstream 403986 4454619 ~ 4455552 (+)
CI01000306_04863197_04868703 NA coding downstream 1627 4863197 ~ 4868794 (+)
CI01000306_04958429_04977273 NA coding downstream 96771 4958341 ~ 4977418 (+)
CI01000306_05358831_05362667 NA coding downstream 497261 5358831 ~ 5362710 (+)
CI01000306_05368199_05371572 NA coding downstream 506344 5367914 ~ 5371880 (+)
CI01000306_05390270_05392867 NA coding downstream 528003 5389573 ~ 5393074 (+)
G432745 NA non-coding upstream 37156 4822150 ~ 4822382 (+)
G432703 NA non-coding upstream 273178 4580597 ~ 4586360 (+)
G432697 NA non-coding upstream 291702 4567610 ~ 4567836 (+)
G432680 NA non-coding upstream 329012 4530317 ~ 4530526 (+)
G432672 NA non-coding upstream 349829 4509439 ~ 4509709 (+)
G432768 NA non-coding downstream 758 4862328 ~ 4862623 (+)
G432795 NA non-coding downstream 82962 4944532 ~ 4944764 (+)
G432907 NA non-coding downstream 351221 5212791 ~ 5213089 (+)
G432912 NA non-coding downstream 361248 5222818 ~ 5223318 (+)
G432918 NA non-coding downstream 377677 5239247 ~ 5239471 (+)
G432678 NA other upstream 337002 4522182 ~ 4522536 (+)
G432583 NA other upstream 531716 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1050540 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1076519 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1081988 3772689 ~ 3777550 (+)
G432958 NA other downstream 797358 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 1118943 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 1244573 6106143 ~ 6108175 (+)
G433724 NA other downstream 1247041 6108611 ~ 6129778 (+)
G434545 NA other downstream 2257747 7119317 ~ 7119859 (+)

Expression


Co-expression Network