CI01000306_04958429_04977273


Basic Information

Item Value
gene id CI01000306_04958429_04977273
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 4958341 ~ 4977418 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_04958429_04977273.mRNA
CTTTAAAACCATCCAAGGAACACTTTAGCATTGCACTCTGAGCACGAAGATCATTCTGACCATCTGGCTGTCTTGTAAGCATTCGACGATGCGGCTGCTACAGGTCCTGCTACATTTTGCTACAGGTTTACAGGGAAGTAGTGACACTGAAAGGTTGATTCTGGTTGCTTTTGTAGTTGACTCTAATAATGCTTTAAAAGAAACACGAAATGGGCCTTTCGAAAAAATAGACACTGTCACCCACTTTGTCATCATGACAAGAGAAGAGGACAGTAATGAGAACATCAAGAGCATAGTGGGAAACACAAGCCTGAGGATACGCAAAGGCACACACATACACACTCACATAGACACTCAATGGCTTAATCCGATCGTGACCTTAGATCACTACCACAGTCATACTGAAAATGAGGCTTCAGGACGCAGCTGTGAGCTTAAACTGCTCTACCTGCTCACCTGGGAACCCATGGTGAGCCGAGGTCCCCGCTGTGCCGAGTACAACCACCAGGGAGGACAGAGCAGTGATTGGATGAGGCATTCTCTGGCAGATTGGAACTCTGGGATTAAAACTCATGCTGCCAGACATGTTTCAGCTCCAGTTGAGCCCAAATCAGGGCCGAAGAGAACATCTGAACGCCTCTGGTTTCACAAGATGCGAACAGGCAGGGGTGGGCGAGAGCGCCGGCAGACAGATGGTCCAGAAGACATTATGGGCCACAGCAGATCCTGTGTGTCTGCATATGTTCAGAGCGTTCCAGAAGATACTGTCTCTTTGCACTACACCTGCCCCTTTGGACAGAGACTCTCACCATCTGGATCTGACACATTTTATGCTCCTGACACAGAAAAGAAAGCTATAATAGCTTTGATTTCACCATTAAAAGAACAAAAACACAACAAGAACTTCATGCTCCCAGCACCTGAAGCACATAGCTTCAGGTGCTCTTGGGTCACAATGGTCCTTGTCTATTCAATTTCAGACCATGTCACGACAGAGGACACGGCCTTGATGCTTGCAGCTTGTGAAGTGCTTAAAAACCGAGCGAGCTCACCACAAACCTCTCATTATCGTTCTGATGACGGAATGAAACATGAGGCACGTTTAAACGAAGCTTCTGGGCTGAGGGGATTTCAAGGCCTTGTGATCAAGCGGTGTGGCATAATAAACCAAGTGACGGCATTCACACGGTGGTGTAGAAGAGGGACGGAGGCACAGGAGCGCCTCTCTCTTGGAGTCTGCAGCAGGCGAGAGGGCTGTCAAAATGAATGCATGAAGAAAGCTATTGTTTCCTCGCCGTGCACATGCCCAGGGAACAGAAACGTGTATATGCAAGAATCACAGCCTGAGAGAGAGAAAACCCACATAAAAAAGAGAGGAAGGATAGGAAGGAAAAATAAAGAGTGTACCATCAGAAAATGGGTGTTATTCAAGTGTTACATGCTGTTGGGCTTCTTCTGGCCTAAATCTTCAACCCCACACACCAGGGCTCTTTTCCAAAACTTGCCTACATTGGCTGCATTTGAAGGAATAATTATGCTGTCCCAAGGCAAACATCATAAGACATCATTGCATGTAGTACAACTAATAGATAATCCCAGAATACATTGCAGCTAGGCTGTTATAAAAACTGTTGCATTTTAATGCTCATTTATTGTTAGTTCAATACAAAAATATATACAAACACGTCTGTCAAGTCAGATGAAGATGATGGAGGAGCAGGGAGAGGTGGATCTTAATATCAGCTGATTAAACGTTATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_04958429_04977273.mRNA True 1760 mRNA 0.46 10 4958341 4977418

Neighbor

gene id symbol gene type direction distance location
CI01000306_04863197_04868703 NA coding upstream 89547 4863197 ~ 4868794 (+)
CI01000306_04859604_04861501 NA coding upstream 96771 4859538 ~ 4861570 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding upstream 164187 4788170 ~ 4794154 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding upstream 205240 4686121 ~ 4753101 (+)
CI01000306_04570147_04574537 NMUR3 coding upstream 383613 4569783 ~ 4574728 (+)
CI01000306_05358831_05362667 NA coding downstream 381413 5358831 ~ 5362710 (+)
CI01000306_05368199_05371572 NA coding downstream 390496 5367914 ~ 5371880 (+)
CI01000306_05390270_05392867 NA coding downstream 412155 5389573 ~ 5393074 (+)
CI01000306_05399614_05410516 NA coding downstream 421896 5399314 ~ 5410886 (+)
CI01000306_05456160_05473514 NA coding downstream 478742 5456160 ~ 5473514 (+)
G432795 NA non-coding upstream 13577 4944532 ~ 4944764 (+)
G432768 NA non-coding upstream 95718 4862328 ~ 4862623 (+)
G432745 NA non-coding upstream 135959 4822150 ~ 4822382 (+)
G432703 NA non-coding upstream 371981 4580597 ~ 4586360 (+)
G432697 NA non-coding upstream 390505 4567610 ~ 4567836 (+)
G432907 NA non-coding downstream 235373 5212791 ~ 5213089 (+)
G432912 NA non-coding downstream 245400 5222818 ~ 5223318 (+)
G432918 NA non-coding downstream 261829 5239247 ~ 5239471 (+)
G432925 NA non-coding downstream 268907 5246325 ~ 5246557 (+)
G432902 NA non-coding downstream 270802 5248220 ~ 5249076 (+)
G432678 NA other upstream 435805 4522182 ~ 4522536 (+)
G432583 NA other upstream 630519 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1149343 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1175322 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1180791 3772689 ~ 3777550 (+)
G432958 NA other downstream 681510 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 1003095 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 1128725 6106143 ~ 6108175 (+)
G433724 NA other downstream 1131193 6108611 ~ 6129778 (+)
G434545 NA other downstream 2141899 7119317 ~ 7119859 (+)

Expression


Co-expression Network