CI01000306_05568573_05569674


Basic Information

Item Value
gene id CI01000306_05568573_05569674
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5568371 ~ 5569988 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_05568573_05569674.mRNA
TTATTAAGACCCTAGCAAGGGGCAAAGAAAGCAGCTCCCGTGACAGGCATGCTGAAGAAATAGACCGGACTGAACGTATCAAGCAGCCATGGGGAAGAAGACTTGCGAATTCTGTGAAAAGTGTTTTCACAACAATTTTGAGGAGCCCAGAAGCCTTGTTTGGCATCTGCCTGCTGGCTCTAGCATGCAGCATGCATAGGGTATGAGAAGGCCGAGAGCCATGGGAACGGAGCGAGGACTGTTGGCTCGCGGTGTATGGCTTTGCGGAGTGCTACATCGCAGCCCAGAAATTATTGCAGGCTATATGTCAAAAAAAGCCAGCTTCTCCAGTTGCTCCAAGATGGCCCAGTCGACTCACAGCCCAAGCCAGCCTCAGCGCTATGTCCTGCCTCTGTCAAAAGCGGAGCCTGAAGTCAAACCGGACCCCGAAGCAGTCCTGATGCCTCAGGACAGAGGAGGAAAGGGTCCTGTGCAACCACTCCAGCTCTGGTTGAAAGGCCTTGTCCCATCCCATGCACGGCGCACAGGCCGAAATACTCTCAAGGTGACCCATAGCTGCGTCAAAGCATTGGAAATCACTCCTCTTTTACCAGGACGGGGCAACGCTGTGCGCGGTTTTCAGGAGTAAAGTGGTCATACAGATGCCTCCAAGATGGTCTGGGACGCCCTGTGCAATGGCAGAATAGCCTTTAGCTCATGGGCGACTCCTATGTCGAGTTTGCACCTCAACCACCTAGATATGATGGTAGTGATTTTGGCCTTAAAGGAGTCCTGGCCAGAGCTCACGGGTCAAGCTACACTTCTGGAAAAAAAAACCCTTCAAAACCTCTACAAATGATTCAGAACTCTGCAGCACGTCTTGTCTTCAATAAGCCCAAAAGGGCCCATGTCAGCGCCCCCACCGCACATCCCCTCCCCCTCACCTGAAAAAAAAGAAAAATA

Function

NR:

description
PREDICTED: glutamate receptor ionotropic, delta-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_05568573_05569674.mRNA True 942 mRNA 0.52 2 5568371 5569988

Neighbor

gene id symbol gene type direction distance location
CI01000306_05525004_05533724 RPGRB coding upstream 34647 5525004 ~ 5533724 (+)
CI01000306_05510550_05518436 GUCY1B2 coding upstream 49417 5510550 ~ 5518954 (+)
CI01000306_05456160_05473514 NA coding upstream 94857 5456160 ~ 5473514 (+)
CI01000306_05399614_05410516 NA coding upstream 157485 5399314 ~ 5410886 (+)
CI01000306_05390270_05392867 NA coding upstream 175297 5389573 ~ 5393074 (+)
CI01000306_05581415_05587605 GRPR coding downstream 11280 5581268 ~ 5587661 (+)
CI01000306_05617258_05617548 NA coding downstream 47270 5617258 ~ 5618090 (+)
CI01000306_05650597_05655729 NA coding downstream 80609 5650597 ~ 5655953 (+)
CI01000306_05680240_05680527 NA coding downstream 109758 5679746 ~ 5681035 (+)
CI01000306_05740500_05745336 NHSB, NHS coding downstream 170333 5740321 ~ 5745473 (+)
G433066 NA non-coding upstream 3133 5565027 ~ 5565238 (+)
G433065 NA non-coding upstream 4699 5563418 ~ 5563672 (+)
G432970 NA non-coding upstream 45448 5522161 ~ 5522923 (+)
G433064 NA non-coding upstream 63217 5504912 ~ 5505154 (+)
G433062 NA non-coding upstream 69145 5498992 ~ 5499226 (+)
G433070 NA non-coding downstream 3613 5573601 ~ 5574073 (+)
G432947 NA non-coding downstream 94927 5664915 ~ 5673295 (+)
CI01000306_05755968_05757253 NA non-coding downstream 181681 5755779 ~ 5757390 (+)
G432991 NA non-coding downstream 315212 5885200 ~ 5887156 (+)
G433120 NA non-coding downstream 320973 5890961 ~ 5891184 (+)
G432678 NA other upstream 1045835 4522182 ~ 4522536 (+)
G432583 NA other upstream 1240549 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1759373 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1785352 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1790821 3772689 ~ 3777550 (+)
G432958 NA other downstream 88940 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 410525 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 536155 6106143 ~ 6108175 (+)
G433724 NA other downstream 538623 6108611 ~ 6129778 (+)
G434545 NA other downstream 1549329 7119317 ~ 7119859 (+)

Expression


Co-expression Network