CI01000306_05650597_05655729


Basic Information

Item Value
gene id CI01000306_05650597_05655729
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5650597 ~ 5655953 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_05650597_05655729.mRNA
CATCAGTTCTACTTGCTTTCAAAAGGCAGCGAGTTCATCATGGCAGCAGAGGGGAATCCTGTTTCTGGTGGCGTTACATTGATCCACACTGAATGTGAAGGGAAACACTCATATGAAGTGAAGGGCTTTTTAAACCAAAACAAAGGAATGTTTACAAGCAAGGGAGATAAACTCCTAATGATTAACAACACAAATGTGGAGGATTTGACTCCAAAGGCATTTGCTGGTCTTCTGGTTGAAGGAGCTCCCTTACTTACCATACATCATCCATCCAAAACAAAAACAGAAGAGTGTGAATCCGAGGAGCTCCGTGTCAATGAAAAGGAGAGGACGGTCATAAGTTTCAGCTTGATGATGGTAAGAGAGTCTGAGCTGGAGGCATGTGCAGACCAGGAACCTTCACAAAAAGAGTGGGAAGACTGGGACATTGAGGATGATTGTTGCAATGATGACAATTTGCTAATTGTCTCCATGGCTGATACGAGCTACAGTATGGTTGTTGCTCGAGGCTCTGACCCTGACAACCCTTGCAGCAACTGTGGAAAGACGAATTGCCAGTTTAATGAAGTTGTTGTCCTGCCTGCACAAGCTGAGATTACCTCAAGTTCTTCAAATAATTTGCAGCTGCTTAAAAAGAGAACAAATTTATTTATGAAGACTTTCATGGAGGAAAAGTATGTCTCCAGAAGTCTTCCCAAGCATCGGATATGTTTGAATAATACCATGTCAGAGCCAATCACCATCTACTATTACACCAAAAATGACTGTCCAGGTCTTCCTGTTGTGCTGAACTTCACTAACACAGAAAACTTCTTCAGCTGCACCACAAAGCAAGATGTAAATACAAAGATTTTAACAGTTGTGCAATGTAGAAAGAGTGACTTGCAAAAAATCTGTCCTGATGACCCACAGAAATGGTCCCTTGTATTCTACATGTCTACTGGAGCAGACAATCTCAGGCGTTTTGAGTCAGCTCTCCACAGAGGATGGTTTATCTACACAAAAAATGTAGAGAAATATGAAGTAGACATGAAAAGGGATGATCAGCCTGACTATAGACCAGTCAACACCTTTTTCATCATAATTCAGAGTGAGCAATGTTAAATTCATGGTCTTGATAGAAACCTAGTAATTGTCACAGTGACGAGAAGAGTTTGTAGACTATGTGACACTTGTATATGACATTTTATAACTGGAAACTGTTCTCAAATTAACTTCAGTAAACTGGTGATTACAACCCAACCCTAACTTAATGAGTTGACTTTACTATCCGATTCAAGCTGACGTTACCAACCCTATTGAAGCCTAGTGCTTCTTTAAAAATGTTA

Function

NR:

description
interleukin-1 receptor antagonist, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_05650597_05655729.mRNA True 1328 mRNA 0.40 7 5650597 5655953

Neighbor

gene id symbol gene type direction distance location
CI01000306_05617258_05617548 NA coding upstream 32507 5617258 ~ 5618090 (+)
CI01000306_05581415_05587605 GRPR coding upstream 62936 5581268 ~ 5587661 (+)
CI01000306_05568573_05569674 NA coding upstream 80609 5568371 ~ 5569988 (+)
CI01000306_05525004_05533724 RPGRB coding upstream 116873 5525004 ~ 5533724 (+)
CI01000306_05510550_05518436 GUCY1B2 coding upstream 131643 5510550 ~ 5518954 (+)
CI01000306_05680240_05680527 NA coding downstream 23793 5679746 ~ 5681035 (+)
CI01000306_05740500_05745336 NHSB, NHS coding downstream 84368 5740321 ~ 5745473 (+)
CI01000306_05755968_05757253 NA coding downstream 99826 5755779 ~ 5757390 (+)
CI01000306_05805669_05822854 CDKL5 coding downstream 149716 5805669 ~ 5823408 (+)
CI01000306_05826877_05830536 RS1, RS1A coding downstream 170128 5826081 ~ 5831069 (+)
G433070 NA non-coding upstream 76524 5573601 ~ 5574073 (+)
G433066 NA non-coding upstream 85359 5565027 ~ 5565238 (+)
G433065 NA non-coding upstream 86925 5563418 ~ 5563672 (+)
G432970 NA non-coding upstream 127674 5522161 ~ 5522923 (+)
G433064 NA non-coding upstream 145443 5504912 ~ 5505154 (+)
G432947 NA non-coding downstream 8962 5664915 ~ 5673295 (+)
G432991 NA non-coding downstream 229247 5885200 ~ 5887156 (+)
G433120 NA non-coding downstream 235008 5890961 ~ 5891184 (+)
G432961 NA non-coding downstream 235907 5891860 ~ 5892292 (+)
G432678 NA other upstream 1128061 4522182 ~ 4522536 (+)
G432583 NA other upstream 1322775 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1841599 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1867578 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1873047 3772689 ~ 3777550 (+)
G432958 NA other downstream 2975 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 324560 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 450190 6106143 ~ 6108175 (+)
G433724 NA other downstream 452658 6108611 ~ 6129778 (+)
G434545 NA other downstream 1463364 7119317 ~ 7119859 (+)

Expression


Co-expression Network